|   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | |
. | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | |
|
. | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | P | F | R | A | N | G | V | I | T | A | G | N | A | S | G | V | N | D | G | A | A | A | L | I | I | A | S | E | Q | M | A | A | A | Q | G | L | . |
T | P | R | A | R | I | V | A | M | A | T | A | G | V | . |
. |
E | P | R | L | M | G | L | G | P | V | P | A | T | R | R | V | L | E | R | A | G | L | S | I | H | D |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|   |
|
|   |
|   |
|   |
|   |   |
|
|   | . |   |
|   |   |   |
|   |
|   |   |   |   |   |   | . | . |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|
|
|   |   |   |   |
|   |   |   |
|
|
|
|   |
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|   |   |   |   |
Template Sequence |   |
P | D | R | A | Y | L | P | F | D | E | R | A | A | G | Y | V | P | G | E | G | G | A | I | L | V | L | E | D | S | A | A | A | E | A | R | G | R | H | D | A | Y | G | E | L | A | G | C | A | S | T | F | D | P | A | P | G | S | G | R | P | A | G | L | E | R | A | I | R | L | A | L | N | D | A | G | T | G | P | E | D |
Template Known Secondary structure |   |
G | G | G | S |
|
| T | T | S | T | T |
|
|
|
|
| B |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | T |
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T |
|
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| G | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
211 | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 |
  |
  |   |
317 | . | . | 320 | . | . | . | . | . | . | . | . | . | |
|
|
|
330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|  |  |  | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
M | D | V | I | E | L | N | E | A | F | A | A | Q | . |
. |
. |
. |
A | L | G | V | L | R | E | L | G | L | P | D | D | A | P | H | V | N | P | N | G | G | A | I | A | L | G | H | P | L | G | M | S | G | A | R | L | A | L | A | A | S | H | E | L | H | R | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|
|   |   |
|
|
|
|   |
|   |   |   | . | . | . | . |   |
|   |   |   |
|   |
|
|
|   |   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |
|
|
|   |
|
|
|
|   |   |   |
|   |
|   |   |   |
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |
|   |   |
|
|
|
|
|   |   |   |
|   |   |
|   |   |
|
|   |   |
| . |
|
|   |   |   |   |   |
|   |
|   |
|   |   |   | . | . |
|
|   |   |   |
|
|
|   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | D | V | V | F | A | D | G | A | G | V | P | E | L | D | A | A | E | A | R | A | I | G | R | V | . |
F | G | R | E | G | V | P | V | T | V | P | K | T | T | T | . |
. |
G | R | L | Y | S | G | G | G | P | L | D | V | V | T | A | L | M | S | L | R | E | G | V | I | A | P | T | A | G | V | T | S | V | P | R | E | Y |
Template Known Secondary structure |   |
|
|  |  |  |
|
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
| T | T |
| S |  |  |  |
| G | G | G | G | T | . | . |
| B |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | B |
|
| B |
| S |
|
|
|
|
| G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
| . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
291 | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | |
. | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | |
|
. | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
378 | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | G | R | Y | A | L | C | T | M | C | I | G | V | G | Q | G | I | A | M | I | L | E | R |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|
|   |   |   |   |   |
|
|
|   |   |   |
|   |   |
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |
|
|   |   |
Template Sequence |   |
G | I | D | L | V | L | G | E | P | R | S | T | A | P | R | T | A | L | V | L | A | R | G | R | W | G | F | N | S | A | A | V | L | R | R |
Template Known Secondary structure |   |
|
|  |  |
| B | S | S |
| B |
|
|
|
| S |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
368 | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . |
  |