Job Description P0C7L2 Confidence 100.00% Date Thu Jan 5 11:30:04 GMT 2012 Rank 10 Aligned Residues 375 % Identity 47% Template c3goaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-ketoacyl-coa thiolase; PDBTitle: crystal structure of the salmonella typhimurium fada 3-2 ketoacyl-coa thiolase Resolution 1.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		E	A	F	I	C	D	G	I	R	T	P	I	G	R	.	Y	G	G	A	L	S	S	V	R	A	D	D	L	A	A	I	P	L	R	E	L	L	V	R	N	P	R	L	D	A	E	C	I	D	D	V	I	L	G	C	A	N	Q	A	G	E	D	N	R	N	V	A	R	M	A	T	L	L	A	G	L	P	Q	S	V
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		Q	V	V	I	V	D	A	I	R	T	P	X	G	R	S	K	G	G	A	F	R	N	V	R	A	E	D	L	S	A	H	L	X	R	S	L	L	A	R	N	P	S	L	T	A	A	T	L	D	D	I	Y	W	G	C	V	Q	Q	T	L	E	Q	G	F	N	I	A	R	N	A	A	L	L	A	E	I	P	H	S	V
Template Known Secondary structure																T	T	T		T	T	T	T	S																		T	T	S		G	G	G									S			S	G	G	G	T	T	T									T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	T	T	I	N	R	L	C	G	S	G	L	D	A	L	G	F	A	A	R	A	I	K	A	G	D	G	D	L	L	I	A	G	G	V	E	S	M	S	R	A	P	F	V	M	G	K	A	A	S	A	F	S	R	Q	A	E	M	F	D	T	T	I	G	W	R	F	V	N	P	L	M	A	Q	Q	F	G	T	D
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	V	T	V	N	R	L	C	G	S	S	X	Q	A	L	H	D	A	A	R	X	I	X	T	G	D	A	Q	V	C	L	V	G	G	V	E	H	X	G	H	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	S	H	G	V	D	F	H	P	G	L	S	G
Template Known Secondary structure									G	G	G															T	T	S		S										T	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T					T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																									.	.	.	.	130	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	P	E	T	A	E	N	V	A	E	L	L	K	I	S	R	E	D	Q	D	S	F	A	L	R	S	Q	Q	R	T	A	K	A	Q	S	S	G	I	L	A	E	E	I	V	P	V	V	L	K	N	K	K	G	V	V	T	E	I	Q	H	D	E	H	L	R	P	E	T	T	L	E	Q	L	R	G	L	K	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	X	G	L	T	A	E	X	L	S	R	L	H	G	I	S	R	E	X	Q	D	Q	F	A	A	R	S	H	A	R	A	W	A	A	T	Q	S	G	A	F	K	T	E	I	I	P	T	G	G	H	D	A	D	G	V	L	K	Q	F	N	Y	D	E	V	I	R	P	E	T	T	V	E	A	L	S	T	L	R	P	A
Template Known Secondary structure														T	T																								T	T	T	T	T	T	B								T	T	S							S		T	T			T	T							T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		242	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		F	R	A	N	G	.	V	I	T	A	G	N	A	S	G	V	N	D	G	A	A	A	L	I	I	A	S	E	Q	M	A	A	A	Q	G	L	T	P	R	A	R	I	V	A	M	A	T	A	G	V	E	P	R	L	M	G	L	G	P	V	P	A	T	R	R	V	L	E	R	A	G	L	S	I	H	D	M	D	V	I
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		F	D	P	V	S	G	T	V	T	A	G	T	S	S	A	L	S	D	G	A	A	A	X	L	V	X	S	E	S	R	A	R	E	L	G	L	K	P	R	A	R	I	R	S	X	A	V	V	G	C	D	P	S	I	X	G	Y	G	P	V	P	A	S	K	L	A	L	K	K	A	G	L	S	A	S	D	I	D	V	F
Template Known Secondary structure		S		T	T	T					G	G	G	B																					T	T																	T	T	S	T	T		T													T			G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		E	L	N	E	A	F	A	A	Q	A	L	G	V	L	R	E	L	G	L	P	D	D	A	P	.	H	V	N	P	N	G	G	A	I	A	L	G	H	P	L	G	M	S	G	A	R	L	A	L	A	A	S	H	E	L	H	R	R	N	G	R	Y	A	L	C	T	M	C	I	G	V	G	Q	G	I	A	M	I	L	E
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		E	X	N	E	A	F	A	A	Q	I	L	P	C	I	K	D	L	G	L	X	E	Q	I	D	E	K	I	N	L	N	G	G	A	I	A	L	G	H	P	L	G	C	S	G	A	R	I	S	T	T	L	I	N	L	X	E	R	K	D	A	Q	F	G	L	A	T	X	C	I	G	L	G	Q	G	I	A	T	V	F	E
Template Known Secondary structure						S	B											T	T		G	G	G					B	S	T	T																												T	T		S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		386	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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