Job Description P0C7L2 Confidence 99.89% Date Thu Jan 5 11:30:04 GMT 2012 Rank 70 Aligned Residues 259 % Identity 19% Template c3euoB_ PDB info PDB header:transferase Chain: B: PDB Molecule:type iii pentaketide synthase; PDBTitle: crystal structure of a fungal type iii polyketide synthase,2 oras Resolution 1.75 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	D	D	L	A	A	I	P	L	R	E	L	L	V	R	N	P	R	L	D	A	E	C	I	D	D	V	I	L	G	C	A	N	Q	A	G	E	D	N	R	N	V	A	R	M	A	T	L	L	A	G	L	P	Q	S	V	S	G	T	T	I	N	R	L	C	G	S	G	L	D	A	L	G	F	A	A	R	A	I
Query Conservation
Alig confidence																	.																			.	.
Template Conservation																	.																			.	.
Template Sequence		D	G	V	P	L	A	V	E	A	S	R	K	A	M	A	.	E	A	R	L	V	P	A	Q	I	T	H	M	V	S	T	T	C	T	.	.	D	S	A	N	P	G	Y	D	H	Y	V	A	K	E	L	G	L	S	D	R	L	E	K	V	L	L	H	G	I	G	S	G	G	L	A	A	L	R	T	A	A	N	L	C
Template Known Secondary structure			T														.		T	T			G	G	G									S	S	.	.				S	S											T			T	T								S
Template Predicted Secondary structure																	.																			.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		105	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		K	A	.	.	.	.	G	D	G	D	L	L	I	A	G	G	V	E	S	M	S	R	A	P	F	V	M	G	K	A	A	S	A	F	S	R	Q	A	E	M	F	D	T	T	I	G	W	R	F	V	N	P	L	M	A	Q	Q	F	G	T	D	S	M	P	E	T	A	E	N	V	A	E	L	L	K	I	S	R	E	D
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Sequence		L	G	H	T	A	R	G	K	P	A	R	I	L	V	L	A	L	E	V	S	T	T	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	S	E	L	E	S	I	D	A	L	Q	.	.	.	.	.
Template Known Secondary structure							T	T														G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																																									190	.	.	.	.	.	.	.	.	.	200	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	S	F	A	L	R	S	Q	Q	R	T	A	K	A	Q	S	S	G	I	L	A	E	E	I	V	P	V	V	L	K	N	K	K	G	V	V	T	E	I	Q	H	D	E	H	L	R	P	E	T	T	L	E	Q	L	R	G	L	K	A	P	F	R	A	N	G	V	I	T	A	G	N	A	S	G	V	N	D	G	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	R	I	G	I	A	L	F	S	D	C	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																																					202	.	.	.	.	.	.	.	210	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.																							.	.	.	300	.	.	.	.	.	.	.	.								.	310	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Query Sequence		A	A	L	I	I	A	S	E	Q	M	A	A	A	Q	G	L	T	P	R	A	R	I	V	A	M	A	T	A	G	V	E	P	R	L	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	P	V	P	A	T	R	R	V	L	E	.	.	.	.	.	.	.	R	A	G
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	V	I	L	S	N	G	I	G	E	A	P	G	K	P	A	I	Y	D	L	L	G	W	E	N	R	V	I	P	D	S	E	H	D	L	G	F	D	V	D	P	M	G	W	K	V	V	L	S	P	R	V	P	V	L	A	K	A	S	L	Q	P	T	Y	A	D	L	L	S	S	L	Q	D	Q	L	P	S	S	Y
Template Known Secondary structure									S	T	T		S	S	S				S												T	T		G	G	G							T	T								T	T																			T	T	T	T	T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.							.	.	.	380	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		L	S	I	H	D	M	D	V	I	E	L	N	E	A	F	A	A	Q	A	L	G	V	L	R	E	L	G	L	P	D	D	A	P	H	V	N	P	N	G	G	A	I	A	L	G	H	P	L	G	M	S	G	A	R	L	A	L	A	A	S	H	E	L	H	R	.	.	.	.	.	.	R	N	G	R	Y	A	L	C	T
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence												.																																.																							.	.	.	.	.	.
Template Conservation												.																																.
Template Sequence		Q	K	P	A	D	F	D	W	A	M	.	H	P	G	G	A	T	I	L	S	G	A	E	S	A	M	G	L	T	P	E	H	M	R	A	S	Y	D	R	Y	I	N	.	H	G	N	S	S	S	A	T	I	F	S	V	L	N	R	L	R	E	K	D	M	D	A	L	A	P	G	G	K	V	K	E	Y	V	V	G	C
Template Known Secondary structure			S	G	G	G	S					.			S	S												T			G	G	G	G										.			B		G	G	G										T	S					T	T	S	G	G	G				S
Template Predicted Secondary structure												.																																.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		M	C	I	G	V	G	Q	G	I	A	M	I	L	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	G	P	G	I	N	V	E	M	C	M	L	K	R
Template Known Secondary structure					T	T	T
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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