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Job DescriptionP0C7L2
Confidence99.87%DateThu Jan 5 11:30:04 GMT 2012
Rank71Aligned Residues259
% Identity19%Templatec3e1hA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a type iii polyketide synthase2 pksiiinc from neurospora crassa
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80........ .90.........100...
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Query Sequence  RADDLAAIPLRELLVRNPRLDAECIDDVILGCANQAGEDNRNVARMATLLAGLPQSVSGTTINR. LCGSGLDALGFAARA
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Template Sequence  DGVPLAVEASRKAMA. EARLVPAQITHMVSTTC. TDSAN. PGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANL
Template Known Secondary structure  T.T

GGG


S.S


S.S
T

TT

S
GGG
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   8990.........100... ......110.........120 ..... ....130.........140.........150.........160.....
 
   104.. ...110.........120.........130.........140.........150.........160.........170.........
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Query Sequence  IKA. . . . GDGDLLIAGGVESMSRAPFVMGKAASAFSRQAEMFDTTIGWRFVNPLMAQQFGTDSMPETAENVAELLKISRE
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Template Sequence  CLGHTARGKPARILVLALEVSTTM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VRSELESIDALQ. . . .
Template Known Secondary structure  TT




GGG........................................T....
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   166...170.........180......... 190.........200.
 
   180.........190.........200.........210.........220.........230.........240.........250.........
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Query Sequence  DQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKGVVTEIQHDEHLRPETTLEQLRGLKAPFRANGVITAGNASGVNDG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ETRIGIALFSDC
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B

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   202.......210...
 
   260.........270.........280.........290...... ...300.........310
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Query Sequence  AAALIIASEQMAAAQGLTPRARIVAMATAGVEPRLMG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . LGPVPATRRVLERA
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Template Sequence  ASAVILSNGIGEAPGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSS
Template Known Secondary structure 

TT

TT


S
TT
TTTTT
TTGGGS
TT
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   214.....220.........230.........240.........250.........260.........270.........280.........290...
 
   311........320.........330.........340.........350.........360.........370...... ...380....
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Query Sequence  GLSIHDMDVIELNEAFAAQALGVLRELGLPDDAPHVNPNGGAIALGHPLGMSGARLALAASHELHR. . . . . . RNGRYALC
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Template Sequence  YQKPADFDWA. MHPGGATILSGAESAMGLTPEHMRASYD. RYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVG
Template Known Secondary structure  S
SGGGS.

SST

GGGG.
B
GGGTSTTTTS
SSSS


S
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   294.....300... ......310.........320.........330. ........340.........350.........360.........370.
 
   385....390.........400
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Query Sequence  TMCIGVGQGIAMILER
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Template Sequence  CAFGPGINVEMCMLKR
Template Known Secondary structure  TTT
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   372.......380.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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