Job Description P0C7L2 Confidence 99.92% Date Thu Jan 5 11:30:04 GMT 2012 Rank 67 Aligned Residues 251 % Identity 20% Template c3aleB_ PDB info PDB header:transferase Chain: B: PDB Molecule:os07g0271500 protein; PDBTitle: a type iii polyketide synthase that produces diarylheptanoid Resolution 2.50 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		R	A	D	D	L	A	A	I	P	L	R	E	L	L	V	R	N	P	R	L	D	A	E	C	I	D	D	V	I	L	G	C	A	N	Q	A	G	E	D	N	R	N	V	A	R	M	A	T	L	L	A	G	L	P	Q	S	V	S	G	T	T	I	N	.	R	L	C	G	S	G	L	D	A	L	G	F	A	A	R	A
Query Conservation																																																																	.
Alig confidence																	.																							.	.																								.
Template Conservation																	.																							.	.
Template Sequence		A	V	P	E	L	A	A	E	A	A	K	K	A	I	A	.	E	W	G	R	P	A	A	D	I	T	H	L	V	V	T	T	N	S	G	A	H	V	.	.	P	G	V	D	F	R	L	V	P	L	L	G	L	R	P	S	V	R	R	T	M	L	H	L	N	G	C	F	A	G	C	A	A	L	R	L	A	K	D	L
Template Known Secondary structure																	.				S		G	G	G									S	S				S	.	.	S											T			T	T										G	G	G
Template Predicted Secondary structure																	.																							.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	A	G	D	G	D	L	L	I	A	G	G	V	E	S	M	S	R	A	P	F	V	M	G	K	A	A	S	A	F	S	R	Q	A	E	M	F	D	T	T	I	G	W	R	F	V	N	P	L	M	A	Q	Q	F	G	T	D	S	M	P	E	T	A	E	N	V	A	E	L	L	K	I	S	R	E	D	Q	D	S
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	N	S	R	G	A	R	V	L	V	V	A	A	E	L	T	L	M	Y	F	T	G	P	D	E	G	C	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	S	T	T											G	G	G	T						T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	L	R	S	Q	Q	R	T	A	K	A	Q	S	S	G	I	L	A	E	E	I	V	P	V	V	L	K	N	K	K	G	V	V	T	E	I	Q	H	D	E	H	L	R	P	E	T	T	L	E	Q	L	R	G	L	K	A	P	F	R	A	N	G	V	I	T	A	G	N	A	S	G	V	N	D	G	A	A	A	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	L	L	V	Q	G	L	F	G	D	G	A	A	A	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																																		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.																					.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	A	S	E	Q	M	A	A	A	Q	G	L	T	P	R	A	R	I	V	A	M	A	T	A	G	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	L	M	G	L	G	P	V	P	A	T	R	R	V	L	E	R	A	G	L	S	I	H	D	M	D	V	I	E	L	N
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation																																																																							.	.	.
Template Sequence		I	V	G	A	D	A	D	D	V	E	R	P	L	F	E	I	V	S	A	A	Q	T	I	I	P	E	S	D	H	A	L	N	M	R	F	T	E	R	R	L	D	G	V	L	G	R	Q	V	P	G	L	I	G	D	N	V	E	R	C	L	L	D	M	F	G	P	G	G	W	.	.	.	N	D	L	F	W	A	V	H
Template Known Secondary structure					S	S			S	S	S															T	T		T	T	T							S	S	S							T	T																						G	.	.	.	G	G	S
Template Predicted Secondary structure																																																																							.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	F	A	A	Q	A	L	G	V	L	R	E	L	G	L	P	D	D	A	P	H	V	N	P	N	G	G	A	I	A	L	G	H	P	L	G	M	S	G	A	R	L	A	L	A	A	S	H	E	L	H	R	R	N	G	R	Y	A	L	C	T	M	C	I	G	V	G	Q	G	I	A	M	I	L	E
Query Conservation
Alig confidence																																.																					.	.
Template Conservation																																.																					.	.
Template Sequence		P	G	S	S	T	I	M	D	Q	V	D	A	A	L	G	L	E	P	G	K	L	A	A	S	R	R	V	L	S	D	.	Y	G	N	M	S	G	A	T	V	I	F	A	L	D	E	L	R	R	Q	R	.	.	K	W	P	E	L	G	V	M	M	A	F	G	P	G	M	T	V	D	A	M	L	L	H
Template Known Secondary structure																T			G	G	G	G										.			B		G	G	G														.	.				S									T	T	T
Template Predicted Secondary structure																																.																					.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions