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Job DescriptionP0C7L2
Confidence100.00%DateThu Jan 5 11:30:04 GMT 2012
Rank30Aligned Residues281
% Identity20%Templatec2vz8B_
PDB info PDB header:transferaseChain: B: PDB Molecule:fatty acid synthase; PDBTitle: crystal structure of mammalian fatty acid synthase
Resolution3.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20........ .30.........40.........50 .........60......
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Query Sequence  DGIRTPIGRYGGALSSVRADD. . . . . . . . . LAAIPLRELLVRNPRLDAECID. . . . DVILGCANQAGEDNRN. . . . . . . .
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Template Sequence  MGKLKDLSRFDASFFGVHSKQANTMDPQLRMLLEVTYEAIV. DGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVG
Template Known Secondary structure 

S
SS


TTTTT

TS
G.GGT

GGGGTT
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TT

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G
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   51........60.........70.........80.........90. ........100.........110.........120.........
 
   67..70.........80.........90.........100.........110.........120.........130......
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Query Sequence  . . . . . . . . . . VARMATLLAGLPQSVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVESMSRAPFVMGKAASAFSR
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Template Sequence  YSMIGCQRAMMANRLSFFFDF. . KGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGM. .
Template Known Secondary structure  GGGGGTSTTT
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S


TTSTTSS
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   130.........140.........150 .........160.........170.........180.........190.........200.....
 
   137..140.........150.........160.........170.........180.........190.........200.........210......
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Query Sequence  QAEMFDTTIGWRFVNPLMAQQFGTDSMPETAENVAELLKISREDQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKGV
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   217..220.........230.........240.........250.........260.........270.........280.........290..
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Query Sequence  VTEIQHDEHLRPETTLEQLRGLKAPFRANGVITAGNASGVNDGAAALIIASEQMAAAQGLTPRARIVAMATAGVEP. . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . LSQDGTCRSFDAEGTGYCRAEAVVAVLLTKKSLA. . . . RRVYATILNAGTNTDGSKEQG
Template Known Secondary structure  .....................B
TT
S

SSBTT


B
BB
GGG
....S

S



TT
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   206...210.........220.........230......... 240.........250.........260
 
   293......300.........310.........320....... ..330.........340.........350.... .....360.....
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Query Sequence  . . RLMGLGPVPATRRVLERAGLSIHDMDVIELNEAFA. . . . AQALGVLRELGLPDDAPHVNPNGGAIA. LGHPLGMSGAR
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Template Sequence  VTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDPQELNGIVNA. LCATRREPLLIGSTKSNMGHPEPASGVA
Template Known Secondary structure  SSS

TTSGGGSS
TTS







TT.
S
SSS


S
B
GGG
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   261........270.........280.........290.........300.........310. ........320.........330.........
 
   366...370....... ..380.........390.........
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Query Sequence  LALAASHELHRR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NGRYALCTMCIGVGQGIAMILE
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Template Sequence  ALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQ
Template Known Secondary structure  TTT


SS

SB
TTSSSSSSSS


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S

TTT
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   340.........350.........360.........370.........380.........390.........400.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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