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Job DescriptionP0C7L2
Confidence99.97%DateThu Jan 5 11:30:04 GMT 2012
Rank36Aligned Residues288
% Identity23%Templatec2hg4A_
PDB info PDB header:transferaseChain: A: PDB Molecule:6-deoxyerythronolide b synthase; PDBTitle: structure of the ketosynthase-acyltransferase didomain of module 52 from debs.
Resolution2.73 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20........ .30.........40.........50 .........60....
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Query Sequence  CDGIRTPIGRYGGALSSVRADD. . . . . . . . . LAAIPLRELLVRNPRLDAECID. . . . DVILGCANQAGEDN. . . . . . . . .
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Template Sequence  LGGXLAAAGDFDAGFFGISPREALAXDPQQRIXLEISWEALE. RAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVL
Template Known Secondary structure  B

TTTT
TGGGT

S
.TT

GGGGTTS





S

TTSS
GGGG
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   88.90.........100.........110.........120......... 130.........140.........150.........160......
 
   65....70.........80.........90.........100.........110.........120.........130.....
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Query Sequence  . . . . . . . . . RNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVESMSRAPFVMGKAASAFS
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Template Sequence  GYVGTGTASSVASGRVAYCLGL. . EGPAXTVDTACSSGLTALHLAXESLRRDECGLALAGGVTVXSSPGAFTEFRSQGG.
Template Known Secondary structure  GG
T
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S


GGGTTS
S


STTTSS
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   167..170.........180........ .190.........200.........210.........220.........230.........240...
 
   136...140.........150.........160.........170.........180.........190.........200.........210.....
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Query Sequence  RQAEMFDTTIGWRFVNPLMAQQFGTDSMPETAENVAELLKISREDQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   216...220.........230.........240.........250.........260.........270.........280.........290
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Query Sequence  VVTEIQHDEHLRPETTLEQLRGLKAPFRANGVITAGNASGVNDGAAALIIASEQMAAAQGLTPRARIVAMATAGV. . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . LAADGRCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNG
Template Known Secondary structure  ......................B
TTS


TTBTT


B
BB
TT





S
SS
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   244.....250.........260.........270.........280.........290.........300.
 
   291........300.........310.........320....... ..330.........340.........350.... .....360....
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Query Sequence  EPRLMGLGPVPATRRVLERAGLSIHDMDVIELNEAFA. . . . . AQALGVLRELGLPDDAPHVNPNGGAIA. LGHPLGMSGA
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Template Sequence  LTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGV
Template Known Secondary structure  SS


T

GGG







TTTTTTTSS
TTS


T
B
GGGTT
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   302.......310.........320.........330.........340.........350.........360.........370.........380.
 
   365....370..... ....380.........390.........400
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Query Sequence  RLALAASHELH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RRNGRYALCTMCIGVGQGIAMILER
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Template Sequence  AGVXKAVLALRHGEXPRTLHFDEPSPQIEWAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEE
Template Known Secondary structure  T


TT

SB
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   382.......390.........400.........410.........420.........430.........440.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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