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Job DescriptionP0C7L2
Confidence99.96%DateThu Jan 5 11:30:04 GMT 2012
Rank40Aligned Residues242
% Identity21%Templatec2ebdB_
PDB info PDB header:transferaseChain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase 3; PDBTitle: crystal structure of 3-oxoacyl-[acyl-carrier-protein] synthase iii2 from aquifex aeolicus vf5
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80.........90.........100.
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Query Sequence  SSVRADDLAAIPLRELLVRNPRLDAECIDDVILGCANQAGEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAA
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Template Sequence  KEETITYMATQAAKEALR. EANLSPEELDLIILATLTPQKRF. PSTACLVQAQLKA. KGVYAFDISAACSGFIYALDIAD
Template Known Secondary structure  SS

.T

GGG
S
SS
SSSS.S
T
.TT


GGG
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   46...50.........60... ......70.........80...... ...90......... 100.........110.........120..
 
   102.......110.........120.........130.........140.........150.........160.........170.........180.
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Query Sequence  RAIKAGDGDLLIAGGVESMSRAPFVMGKAASAFSRQAEMFDTTIGWRFVNPLMAQQFGTDSMPETAENVAELLKISREDQ
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Template Sequence  SFIKSGKAKNVLVIGAEKLSEAVDW. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTS
SGGGT

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   123......130.........140.......
 
   182.......190.........200.........210.........220.........230.........240.........250.........260.
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Query Sequence  DSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKGVVTEIQHDEHLRPETTLEQLRGLKAPFRANGVITAGNASGVNDGAA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EDRSTCVLFGDGAG
Template Known Secondary structure  ..................................................................T
TTTTTSB
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   148.150.........160.
 
   262.......270.........280.........290..... ....300.........310.........320
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Query Sequence  ALIIASEQMAAAQGLTPRARIVAMATAGVEPRLM. . . . . . . . . . . . . . . . . . . . . GLGPVPATRRVLERAGLSIHDMDVI
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Template Sequence  AVVVTRS. . . . . . . . EDKSDILATRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLV
Template Known Secondary structure 
........SSS


GGGGGG
TTS

T

GGG
S
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   162...... .170.........180.........190.........200.........210.........220.........230...
 
   321........330.........340.........350.........360.........370.........380.........390.........
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Query Sequence  ELNEAFAAQALGVLRELGLPDDAPHVNPNGGAIALGHPLGMSGARLALAASHELHRRNGRYALCTMCIGVGQGIAMILE
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Template Sequence  IPHQANVRIINALAEKLNIPKEKVFVNIQ. . . . KYGNTSAASIPIALHEAIKEGKVKRGDLILMTAMGGGLTWGAVLLR
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SS
T

GGGB


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B
GGGTT


TT
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   234.....240.........250.........260.. .......270.........280.........290.........300........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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