Return to main results Retrieve Phyre Job Id

Job DescriptionP0C7L2
Confidence100.00%DateThu Jan 5 11:30:04 GMT 2012
Rank23Aligned Residues294
% Identity26%Templatec1oxhD_
PDB info PDB header:transferaseChain: D: PDB Molecule:beta ketoacyl-acyl carrier protein synthase; PDBTitle: the crystal structure of beta-ketoacyl-[acyl carrier2 protein] synthase ii from streptococcus pneumoniae,3 triclinic form
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1....... .10....... ..20........ .30....
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Query Sequence  MREAFICD. GIRTPIGRY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GGALSSVRADD. . . . . . . . . . . . . . . LAAIPL
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Template Sequence  LNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYFVKKDTNRFDNYSLYALYAA
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BTTBSST




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GGGGGT

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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   35....40.........50 .........60.. .......70.........80.....
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Query Sequence  RELLVRNPRLDAECID. . . . DVILGCANQAGE. . . . . . . . . . . . . . . . . . . . . . . . . DNRNVARMATLLAGLPQSVSGTT
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Template Sequence  QEAVN. HANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGA. . NGVCKS
Template Known Secondary structure  .TT

GGGS
GGG
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GGGS
TTSTTT
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   83.... ..90.........100.........110.........120.........130.........140.........150... ......
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  INRLCGSGLDALGFAARAIKAGDGDLLIAGGVESMSRAPFVMGKAASAFSRQAEMFDTTIGWRFVNPLMAQQFGTDSMPE
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Template Sequence  INTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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GGGTTS
S


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   160.........170.........180.........190.......
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  TAENVAELLKISREDQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKGVVTEIQHDEHLRPETTLEQLRGLKAPFRAN
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Template Sequence  . . . . . . . . . . . . . . . . . . FAIAGFQALTALSTT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EDPTRASI
Template Known Secondary structure  ..................T
B


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TTTS

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   198.200.........210.. .......220
 
   246...250.........260.........270.........280.........290 .........300.........310.........320
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Query Sequence  GVITAGNASGVNDGAAALIIASEQMAAAQGLTPRARIVAMATAGV. . . . . EPRLMGLGPVPATRRVLERAGLSIHDMDVI
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Template Sequence  PFDKDRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYV
Template Known Secondary structure  TTBTT


B
BB
T





S
SSS

TT
T

GGG

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   221........230.........240.........250.........260.........270.........280.........290.........300
 
   321...... ..330.........340.........350.........360.........370.....
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Query Sequence  ELNEAFA. . . . AQALGVLRELGLPDDAPHVNPNGGAIALGHPLGMSGARLALAASHELH. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  NAHGTSTPANEKGESGAIVA. . VLGKEVPVSSTKSFT. . GHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANV
Template Known Secondary structure 



S
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B
GGGTT

BSS

SB
TT

S
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   301........310.........320 .........330..... ....340.........350.........360.........370......
 
   376...380.........390.........400
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Query Sequence  . . . . . . RRNGRYALCTMCIGVGQGIAMILER
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Template Sequence  VYGQGLEKEIPYAISNTFGFGGHNAVLAFKR
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BSS



STTT
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   377..380.........390.........400.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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