Job Description P0C7L2 Confidence 100.00% Date Thu Jan 5 11:30:04 GMT 2012 Rank 7 Aligned Residues 379 % Identity 39% Template c1afwB_ PDB info PDB header:thiolase Chain: B: PDB Molecule:3-ketoacetyl-coa thiolase; PDBTitle: the 1.8 angstrom crystal structure of the dimeric2 peroxisomal thiolase of saccharomyces cerevisiae Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																		.																									.	.	.
Query SS confidence																		.																									.	.	.
Query Sequence		M	R	E	A	F	I	C	D	G	I	R	T	P	I	G	R	.	Y	G	G	A	L	S	S	V	R	A	D	D	L	A	A	I	P	L	R	E	L	L	V	R	.	.	.	N	P	R	L	D	A	E	C	I	D	D	V	I	L	G	C	A	N	Q	A	G	E	D	N	R	N	V	A	R	M	A	T	L	L	A	G
Query Conservation																		.																									.	.	.
Alig confidence																		.																									.	.	.																								.
Template Conservation																																																																					.
Template Sequence		P	E	D	V	V	I	V	A	A	N	R	S	A	I	G	K	G	F	K	G	A	F	K	D	V	N	T	D	Y	L	L	Y	N	F	L	N	E	F	I	G	R	F	P	E	P	L	R	A	D	L	N	L	I	E	E	V	A	C	G	N	V	L	N	V	G	A	G	.	A	T	E	H	R	A	A	C	L	A	S	G
Template Known Secondary structure		T	T															T	T	T	S	T	T	T	T																	T	S								G	G	G									S	S	S	G	G	G	G	.											T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	Q	S	V	S	G	T	T	I	N	R	L	C	G	S	G	L	D	A	L	G	F	A	A	R	A	I	K	A	G	D	G	D	L	L	I	A	G	G	V	E	S	M	S	R	A	P	F	V	M	G	K	A	A	S	A	F	S	R	Q	A	E	M	F	D	T	T	I	G	W	R	F	V	N	P	L	M	A	Q
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	Y	S	T	P	F	V	A	L	N	R	Q	C	S	S	G	L	T	A	V	N	D	I	A	N	K	I	K	V	G	Q	I	D	I	G	L	A	L	G	V	E	S	M	T	N	N	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	N	V	N	P	L	G	M	I	S	S	E	E	L	Q	K	N	R	E	A
Template Known Secondary structure				T	T	S								G	G	G															T	T	S		S														.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	S		T	T		S										T	T	G
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.													.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	G	T	D	S	M	P	E	T	A	E	N	V	A	E	L	L	K	I	S	R	E	D	Q	D	S	F	A	L	R	S	Q	Q	R	T	A	K	A	Q	S	S	G	I	L	A	E	E	I	V	P	V	V	L	K	N	K	K	G	V	V	T	E	I	Q	H	D	E	H	L	R	P	E	T	T	L	E	Q	L	R
Query Conservation
Alig confidence																																																												.	.	.	.
Template Conservation																																																												.	.	.	.
Template Sequence		K	K	C	L	I	P	M	G	I	T	N	E	N	V	A	A	N	F	K	I	S	R	K	D	Q	D	E	F	A	A	N	S	Y	Q	K	A	Y	K	A	K	N	E	G	L	F	E	D	E	I	L	P	I	K	L	P	D	G	S	.	.	.	.	I	C	Q	S	D	E	G	P	R	P	N	V	T	A	E	S	L	S
Template Known Secondary structure		G	G	G	G	S													T	T																							T	T	T	T	T	T	T	B						T	T	S		.	.	.	.				S		S				T	T							T
Template Predicted Secondary structure																																																												.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		G	L	K	A	P	F	R	A	N	G	.	V	I	T	A	G	N	A	S	G	V	N	D	G	A	A	A	L	I	I	A	S	E	Q	M	A	A	A	Q	G	L	T	P	R	A	R	I	V	A	M	A	T	A	G	V	E	P	R	L	M	G	L	G	P	V	P	A	T	R	R	V	L	E	R	A	G	L	S	I	H
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		S	I	R	P	A	F	I	K	D	R	G	T	T	T	A	G	N	A	S	Q	V	S	D	G	V	A	G	V	L	L	A	R	R	S	V	A	N	Q	L	N	L	P	V	L	G	R	Y	I	D	F	Q	T	V	G	V	P	P	E	I	M	G	V	G	P	A	Y	A	I	P	K	V	L	E	A	T	G	L	Q	V	Q
Template Known Secondary structure		T				S	S	S	T	T	T					T	T	S	B																						T				S													G	G	G	G	G	G														T			G	G
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	D	V	I	E	L	N	E	A	F	A	A	Q	A	L	G	V	L	R	E	L	G	L	P	D	D	A	P	H	V	N	P	N	G	G	A	I	A	L	G	H	P	L	G	M	S	G	A	R	L	A	L	A	A	S	H	E	L	H	R	R	N	G	R	Y	A	L	C	T	M	C	I	G	V	G	Q	G	I	A
Query Conservation
Alig confidence																													.	.																																		.	.
Template Conservation																													.	.																																		.	.
Template Sequence		D	I	D	I	F	E	I	N	E	A	F	A	A	Q	A	L	Y	C	I	H	K	L	G	I	D	L	N	.	.	K	V	N	P	R	G	G	A	I	A	L	G	H	P	L	G	C	T	G	A	R	Q	V	A	T	I	L	R	E	L	K	K	D	.	.	Q	I	G	V	V	S	M	C	I	G	T	G	M	G	A	A
Template Known Secondary structure		G		S							S	B												T			G	G	.	.	G	B	S	T	T										T	T	T													S		T	T	.	.										T	T	T
Template Predicted Secondary structure																													.	.																																		.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.			.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		396	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	L	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	F	I	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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