Job Description P0A915 Confidence 77.91% Date Thu Jan 5 11:09:10 GMT 2012 Rank 40 Aligned Residues 149 % Identity 7% Template d1fepa_ SCOP info Transmembrane beta-barrels Porins Ligand-gated protein channel Resolution 2.40

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	L	G	L	T	F	T	Y	M	A	T	D	N	I	G	V	E	L	L	A	A	T	P	F	R	H	K	I	G	T	R	A	T	G	D	I	A	T	V	H	H	L	P	P	T	L	M	A	Q	W	Y	F	G	D	A	S	S	K	F	R	P	Y	V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D
Query Conservation
Alig confidence																																											.														.	.	.	.	.
Template Conservation																																											.														.	.	.	.	.
Template Sequence		E	G	L	E	G	S	L	N	V	P	V	S	E	T	V	X	W	T	N	N	I	T	Y	X	L	K	S	E	N	K	T	T	G	D	R	L	S	I	I	P	E	.	Y	T	L	N	S	T	L	S	W	Q	A	R	E	.	.	.	.	.	D	L	S	X	Q	T	T	F	T	W	Y	G	K	Q	Q	P	K	K	Y	N
Template Known Secondary structure														T	T																T	T	T				S	S				S	.													T	.	.	.	.	.	T													B				S	B
Template Predicted Secondary structure																																											.														.	.	.	.	.
Template SS confidence
		564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.		.	.	.	.	.	610	.	.	.	.	.	.	.						.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.								.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.																										.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.																										.	.	.	.	.
Query Sequence		H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	V	D	Y	L	I	N	R	D	W	L	V	N	M	S	V	W	.	.	.	.	.	.	.	Y	M	D	I	D	T	T	A	N	Y	K	L	G	G	A	Q	Q	H	D	S	V	R	L	D	P	.	.	.	.	.	W	V	F	M
Query Conservation																																									.	.	.	.	.	.	.																										.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation
Template Sequence		Y	K	G	Q	P	A	V	G	P	E	T	K	E	I	S	P	Y	S	I	V	G	L	S	A	T	W	D	V	T	K	N	V	S	L	T	G	G	V	D	N	L	F	D	K	R	L	W	R	A	G	N	A	Q	T	T	G	D	L	A	G	A	N	Y	I	A	G	A	G	A	Y	T	Y	N	E	P	G	R	T	W	Y
Template Known Secondary structure		T	T	S		B			G	G	G	G			B															S	S	S									S	T	T				B				S		S	S					T	T	S	S	S						T	T					B
Template Predicted Secondary structure
Template SS confidence
		638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.
		206	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	A	G	Y	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	S	V	N	T	H	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		718	.	720	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions