Job Description P0A915 Confidence 95.59% Date Thu Jan 5 11:09:10 GMT 2012 Rank 28 Aligned Residues 183 % Identity 16% Template c3dzmB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:hypothetical conserved protein; PDBTitle: crystal structure of a major outer membrane protein from thermus2 thermophilus hb27 Resolution 2.80 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	E	F	F	M	R	A	G	S	A	T	V	R	P	T	E	G	A	G	G	T	L	G	S	L	G	G	F	S	V	T	N	N	T	Q	L	G	L	T	F	T	Y	M	A	T	D	N	I	G	V	E	L	L	A	A	T	P	F	R	H	K	I	G	T	R	A	T	G	D	I	A	T	V	H	H	L	P	P	T
Query Conservation
Alig confidence															.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		A	A	K	F	S	V	E	A	G	A	G	F	Y	.	.	.	.	G	G	F	G	G	Q	L	A	V	V	A	E	D	L	A	P	G	L	P	L	G	V	R	L	G	V	G	F	A	T	S	D	A	L	D	D	G	Y	D	L	G	G	G	T	T	W	G	D	V	K	E	A	G	K	F	S	E	W	G	Q	N	V	T
Template Known Secondary structure															.	.	.	.	S	S													S	S	S																	B		T	T		B		S	S	S		B									T
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		L	M	A	Q	W	Y	F	G	D	A	S	S	K	F	R	P	Y	V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D	H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	V	D	Y	L	I	N	R	D	W	L	V	.	.	N	M	S	V	W	Y	M	D	I	D
Query Conservation																																																																						.	.
Alig confidence																																															.	.																						.	.
Template Conservation																																															.	.
Template Sequence		L	S	L	D	V	L	Y	K	P	L	P	V	E	V	A	P	Y	F	G	V	R	Y	N	F	F	S	G	G	Y	T	D	P	E	D	N	L	T	I	K	A	Q	T	I	S	S	.	.	N	Q	L	G	L	G	L	G	V	R	A	A	Y	P	L	M	P	N	L	S	L	V	G	D	L	G	V	D	Y	Y	F	Q	A
Template Known Secondary structure													S																					S	S	S	S	S	S								.	.																	T	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200																			.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	A	N	Y	K	L	G	G	A	Q	Q	H	D	S	V	R	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	W	V	F	M	F	S	A	G	Y	R	F
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	F	T	R	V	E	E	D	D	S	G	N	K	S	Q	S	S	V	C	P	G	D	S	G	Y	E	D	V	N	K	F	V	T	Q	P	E	W	V	L	K	L	R	L	G	A	A	Y	R	F
Template Known Secondary structure										T	T										T	T	S	T	T								B				S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions