Job Description P0A915 Confidence 98.36% Date Thu Jan 5 11:09:10 GMT 2012 Rank 17 Aligned Residues 163 % Identity 13% Template c3dwoX_ PDB info PDB header:membrane protein Chain: X: PDB Molecule:probable outer membrane protein; PDBTitle: crystal structure of a pseudomonas aeruginosa fadl homologue Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.								.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.
Query Sequence		G	A	G	G	T	L	G	S	L	G	G	F	S	V	T	N	N	T	Q	L	G	L	T	F	T	Y	M	A	T	D	N	I	G	V	E	L	L	A	A	T	P	F	R	H	K	I	G	T	R	A	T	G	D	I	A	T	V	H	H	L	P	P	.	.	.	.	.	.	.	T	L	M	A	Q	W	Y	F	G	D	A
Query Conservation																																																																.	.	.	.	.	.	.
Alig confidence																																																																.	.	.	.	.	.	.									.
Template Conservation																																																																															.
Template Sequence		G	L	D	L	R	M	G	A	S	A	S	A	R	L	D	I	P	A	Y	A	S	L	D	W	V	H	Q	F	N	D	R	L	S	L	G	A	S	A	T	W	T	E	W	S	S	F	Q	D	L	T	L	K	S	H	G	N	T	I	V	S	I	P	Y	T	Y	R	N	T	W	T	L	A	V	G	G	D	Y	.	K	V
Template Known Secondary structure		T					S										B													S	S	S												G	G	G									T	T																							.		S
Template Predicted Secondary structure																																																																															.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		S	S	K	F	R	P	Y	V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D	H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	V	D	Y	L	I	N	R	D	W	L	V	N	M	S	V	W	Y	M	D	I	D	T	T	A	N	Y	K	L	G	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.																																								.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.
Template Sequence		T	D	Q	W	T	M	R	A	G	V	A	Y	D	Q	T	P	T	H	N	A	T	R	D	P	R	I	P	D	G	.	.	.	.	.	.	.	.	D	R	Y	F	A	S	L	G	A	G	Y	R	F	Q	S	M	P	E	L	S	I	D	A	A	Y	S	R	Q	F	V	K	E	V	P	L	K	T	V	N	Q	D	R	L
Template Known Secondary structure		S	S	S													S			T	T	T			S	S	S				.	.	.	.	.	.	.	.														S	S	S	S	S																				B			G	G	G
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.									.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	A	Q	Q	H	D	S	V	R	L	D	P	W	V	F	M	F	S	A	G	Y	R	F
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		G	G	G	R	L	D	G	R	A	T	S	K	G	Q	V	F	S	L	S	A	T	Y	D	F
Template Known Secondary structure		T	S
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions