Job Description P0A915 Confidence 24.08% Date Thu Jan 5 11:09:10 GMT 2012 Rank 47 Aligned Residues 99 % Identity 18% Template c2qdzA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:tpsb transporter fhac; PDBTitle: structure of the membrane protein fhac: a member of the2 omp85/tpsb transporter family Resolution 3.15 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	A	T	G	D	I	A	T	V	H	H	L	P	P	T	L	M	A	Q	W	Y	F	G	D	A	S	S	K	F	R	P	Y	V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D	H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	V	D	Y	L	I	N	R
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		T	S	Q	S	G	D	S	G	V	Y	L	S	N	T	L	T	V	P	V	Q	F	S	L	L	G	K	Q	A	S	V	A	P	F	V	G	A	D	V	G	A	L	K	S	N	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	R	T	I	R	M	A	G	L	A	A	G	V	R	F	D	.	L	P
Template Known Secondary structure			S			S	S		S	S					S														S	S															S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																	.		S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.															.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.		.	520
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	W	L	V	N	M	S	V	W	Y	M	D	I	D	T	T	A	N	Y	K	L	G	G	A	Q	Q	H	D	S	V	R	L	D	P	W	V	F	M	F	S	A	G	Y	R	F
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	A	R	M	S	F	T	Y	S	K	.	.	.	.	.	.	.	.	.	.	.	P	V	G	A	Q	P	G	G	A	P	R	A	P	V	W	L	Y	I	N	A	G	L	S	F
Template Known Secondary structure		S										.	.	.	.	.	.	.	.	.	.	.			S		S		S	S	S					S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		521	.	.	.	.	.	.	.	.	530												.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions