Job Description P0A915 Confidence 16.72% Date Thu Jan 5 11:09:10 GMT 2012 Rank 50 Aligned Residues 134 % Identity 12% Template c2o4vA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:porin p; PDBTitle: an arginine ladder in oprp mediates phosphate specific transfer across2 the outer membrane Resolution 1.94 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																			.	.	120
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	G	L	T	F	T	Y	M	A	T	D	N	I	G	V	E	L	L	A	A	T	P	F	R	H	K	I	G	T	R	A	T	G	D	I	A	T	V	H	H	L	P	P	T	L	M	A	Q	W	Y	F	G	D	A	S	S	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	Y
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.												.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.												.	.	.	.	.
Template Sequence		V	W	G	L	E	G	A	W	A	L	.	G	A	F	S	A	Q	A	E	Y	L	R	.	.	.	.	.	R	T	V	K	A	E	R	D	R	E	D	L	K	A	S	G	Y	Y	A	Q	L	A	Y	T	L	T	G	E	P	R	L	Y	K	L	D	G	A	K	F	D	T	I	K	P	E	N	K	E	I	G	A	W	E
Template Known Secondary structure												.	T	T										.	.	.	.	.							T	T																	T	T								T	T	T	T								S		T	T	T
Template Predicted Secondary structure												.												.	.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D	H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	V	D	Y	L	I	N	R	D	W	L	V	N	M	S	V	W	Y	M	D	I	D	T	T	A	N	Y	K	L	G	G	A	Q	Q	H	D	S	V	R	L	D
Query Conservation
Alig confidence																																	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Sequence		L	F	Y	R	Y	D	S	I	K	V	E	D	D	N	I	V	V	D	S	A	T	R	E	V	G	D	A	K	G	K	T	.	.	.	.	.	H	T	L	G	V	N	W	Y	A	N	E	A	V	K	V	S	A	N	Y	V	K	A	K	T	D	.	.	.	.	.	.	.	.	.	K	I	S	N	A	N	G	D	D	S
Template Known Secondary structure														T	T			S			S	S	B		S	S							.	.	.	.	.										S	S	S														.	.	.	.	.	.	.	.	.	S	B			T	T
Template Predicted Secondary structure																																	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.						.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.										390	.	.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	W	V	F	M	F	S	A	G	Y	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	G	L	V	M	R	L	Q	Y	V	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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