Job Description P07913 Confidence 100.00% Date Thu Jan 5 11:00:39 GMT 2012 Rank 41 Aligned Residues 306 % Identity 22% Template c3fbgA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative arginate lyase; PDBTitle: crystal structure of a putative arginate lyase from staphylococcus2 haemolyticus Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.						.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		M	K	A	L	S	K	L	.	.	.	.	.	K	A	E	E	G	I	W	M	T	D	V	P	V	P	E	L	G	H	N	D	L	L	I	K	I	R	K	T	A	I	C	G	T	D	V	H	I	Y	N	W	D	E	W	S	Q	K	T	I	P	V	P	M	V	V	G	H	E	Y	V	G	E	V	V	G	I	G	Q	E
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.																																												.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		L	K	A	I	G	F	E	Q	P	F	K	L	S	D	G	N	L	F	K	T	F	N	L	D	I	P	E	P	K	V	H	E	I	L	V	K	I	Q	S	I	S	V	N	P	V	D	T	K	Q	R	L	M	D	V	S	.	.	.	.	.	K	A	P	R	V	L	G	F	D	A	I	G	V	V	E	S	V	G	N	E
Template Known Secondary structure							B	S	S				G	G	G																T	T																			T	T	S			S	.	.	.	.	.	S	S		B															T	T
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	G	F	K	I	G	D	R	V	S	G	E	G	H	I	T	C	G	H	C	R	N	C	R	G	G	R	T	H	L	C	R	N	T	I	G	V	G	V	N	R	P	G	C	F	A	E	Y	L	V	I	P	A	F	N	A	F	K	I	P	D	N	I	S	D	D	L	A	A	I	F	D	P	F	G	N	A	V	H
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	M	F	N	Q	G	D	I	V	Y	Y	S	G	S	P	D	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	N	A	E	Y	Q	L	I	N	E	R	L	V	A	K	A	P	K	N	I	S	A	E	Q	A	V	S	L	P	L	T	G	I	T	A	Y
Template Known Secondary structure				S			T	T									T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	B	S						G	G	G						S	S	S						T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																									.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		156	.	.	.	160	.										.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.
Query Sequence		T	A	L	S	F	D	.	.	.	.	.	.	.	.	.	L	V	G	E	D	V	L	V	S	G	A	G	P	I	G	I	M	A	A	A	V	A	K	H	V	G	A	R	N	V	V	I	T	D	V	N	E	Y	R	L	E	L	A	R	K	M	G	I	T	R	A	V	N	V	A	K	E	N	L	N	D	V	M	A	E
Query Conservation								.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																																																																	.
Template Conservation																																																																																	.
Template Sequence		E	T	L	F	D	V	F	G	I	S	R	N	R	N	E	N	E	G	K	T	L	L	I	I	N	G	A	G	G	V	G	S	I	A	T	Q	I	A	K	A	Y	G	L	R	V	I	T	T	A	S	R	N	E	T	I	E	W	T	K	K	M	G	A	D	I	V	L	N	H	K	E	S	L	L	N	Q	F	K	T	.
Template Known Secondary structure						T	T	S				S	S					T	T							S	T	T	S													T	T									S											T		S					T	T	S									.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290												.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	M	T	E	G	F	D	V	G	L	E	M	S	G	A	P	P	A	F	R	T	M	L	D	T	M	N	H	G	G	R	I	A	M	L	G	I	P	P	S	D	M	S	I	D	W	T	K	V	I	F	K	G	L	F	I	K	G	I	Y	G	R	E	.	.	.	.	.	.	.	.	.	.	.	M	F	E	T	W
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																										.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																										.	.
Template Sequence		.	Q	G	I	E	L	V	D	Y	V	F	C	T	F	N	T	D	M	Y	Y	D	D	M	I	Q	L	V	K	P	R	G	H	I	A	T	I	V	A	F	E	N	D	.	.	Q	D	L	N	A	L	K	P	K	S	L	S	F	S	H	E	F	M	F	A	R	P	L	N	Q	T	D	D	M	I	K	H	H	E	Y	L
Template Known Secondary structure		.		T										S	S																						S	S			S	S		.	.			G	G	G	G	T	T	T	T								T	T					T	T		T	T	T
Template Predicted Secondary structure		.																																										.	.
Template SS confidence
			211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.				.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340
Predicted Secondary structure																						.	.	.																			.
Query SS confidence																						.	.	.																			.
Query Sequence		Y	K	M	A	A	L	I	Q	S	G	L	D	L	S	P	I	I	T	H	R	.	.	.	F	S	I	D	D	F	Q	K	G	F	D	A	M	R	S	G	Q	S	.	G	K	V	I	L	S	W
Query Conservation																						.	.	.																			.
Alig confidence												.										.	.	.																			.
Template Conservation												.
Template Sequence		E	D	I	T	N	K	V	E	Q	N	.	I	Y	Q	P	T	T	T	K	V	I	E	G	L	T	T	E	N	I	Y	Q	A	H	Q	I	L	E	S	N	T	M	I	G	K	L	V	I	N	L
Template Known Secondary structure										T	T	.	S	S										S															T	T				S
Template Predicted Secondary structure												.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions