Phyre 2 alignment of P07913 with c2w4qA

Job Description P07913
Confidence 100.00% Date Thu Jan 5 11:00:39 GMT 2012

Rank 54 Aligned Residues 319

% Identity 13% Template c2w4qA_

PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:prostaglandin reductase 2; PDBTitle: crystal structure of human zinc-binding alcohol2 dehydrogenase 1 (zadh1) in ternary complex with nadp and3 18beta-glycyrrhetinic acid

Resolution 2.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.									.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure									.	.	.	.	.	.	.	.																.																																																.
Query SS confidence									.	.	.	.	.	.	.	.																.																																																.
Query Sequence	M	K	A	L	S	K	L	K	.	.	.	.	.	.	.	.	A	E	E	G	I	W	M	T	D	V	P	V	P	E	L	.	G	H	N	D	L	L	I	K	I	R	K	T	A	I	C	G	T	D	V	H	I	Y	N	W	D	E	W	S	Q	K	T	I	P	V	P	M	V	V	G	H	E	Y	V	G	E	V	V	.
Query Conservation									.	.	.	.	.	.	.	.																.																																																.
Alig confidence									.	.	.	.	.	.	.	.																.																											.	.																				.
Template Conservation																																																											.	.
Template Sequence	V	Q	R	V	V	L	N	S	R	P	G	K	N	G	N	P	V	A	E	N	F	R	M	E	E	V	Y	L	P	D	N	I	N	E	G	Q	V	Q	V	R	T	L	Y	L	S	V	D	P	Y	M	R	C	R	M	N	E	D	T	.	.	G	T	D	Y	I	T	P	W	Q	L	S	Q	V	V	D	G	G	G	I	G
Template Known Secondary structure												T	T	S				G	G	G										S				T	T													T	T					T	S	S			.	.	S	S	T	T	S					B	T	S	B
Template Predicted Secondary structure																																																											.	.
Template SS confidence
	3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure	.
Query SS confidence	.
Query Sequence	.	G	I	G	Q	E	V	K	G	F	K	I	G	D	R	V	S	G	E	G	H	I	T	C	G	H	C	R	N	C	R	G	G	R	T	H	L	C	R	N	T	I	G	V	G	V	N	R	P	G	C	F	A	E	Y	L	V	I	P	A	F	N	A	F	K	I	P	D	N	I	S	D	D	L	A	A	I	F	D	P
Query Conservation	.
Alig confidence	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	I	I	E	E	S	K	H	T	N	L	T	K	G	D	F	V	T	S	F	Y	W	P	W	Q	T	K	V	I	L	D	G	N	S	L	E	K	V	D	P	Q	L	V	D	G	H	L	S	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	I	G	M	P	G	L	T	S	L
Template Known Secondary structure							S	T	T			T	T										S	B	S						G	G	G						G	G	G	G	T	T		G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	T	T	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																				130	.	.	.	.	.	.	.	.	.	140	.

	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	F	G	N	A	V	H	T	A	L	S	F	D	L	V	G	E	D	V	L	V	S	G	A	G	P	I	G	I	M	A	A	A	V	A	K	H	V	G	A	R	N	V	V	I	T	D	V	N	E	Y	R	L	E	L	A	R	K	M	G	I	T	R	A	V	N	V	A	K	E	N	L	N	D	V	M	A	E	L	G	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence	I	G	I	Q	E	K	G	H	I	T	A	G	S	N	K	T	M	V	V	S	G	A	A	G	A	C	G	S	V	A	G	Q	I	G	H	F	L	G	C	S	R	V	V	G	I	C	G	T	H	E	K	C	I	L	L	T	S	E	L	G	F	D	A	A	I	N	Y	K	K	D	N	V	A	E	Q	L	R	E	S	C
Template Known Secondary structure							S				T	T								S	S	T	T	B													T	T		S							S											T	S			S					T	T	T	S
Template Predicted Secondary structure
Template SS confidence
	142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.										.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.					290	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.																													.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.																													.	.	.	.
Query Sequence	T	E	G	F	D	V	G	L	E	M	S	G	A	P	P	A	F	R	T	M	L	D	T	M	N	H	G	G	R	I	A	M	.	.	.	.	.	.	.	.	.	L	G	I	P	P	S	D	M	S	I	D	W	T	K	V	I	F	K	G	L	F	I	K	G	I	Y	G	R	.	.	.	.	E	M	F	E	T	W	Y
Query Conservation																																	.	.	.	.	.	.	.	.	.																													.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence	P	A	G	V	D	V	Y	F	D	N	V	G	G	N	I	S	D	T	V	I	S	Q	M	N	E	N	S	H	I	I	L	C	G	Q	I	S	Q	Y	N	K	D	V	P	Y	P	P	P	L	S	P	A	I	E	A	I	Q	K	E	R	N	I	T	R	E	R	F	L	V	L	N	Y	K	D	K	F	E	P	G	I	L
Template Known Secondary structure	T	T								S	S										T	T													G	G	G	T	T	S				S	S														T	T								G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
	222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

	297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence	K	M	A	A	L	I	Q	S	G	L	D	L	S	P	I	I	T	H	R	F	S	I	D	D	F	Q	K	G	F	D	A	M	R	S	G	Q	S	.	G	K	V	I	L	S	W	D
Query Conservation																																						.
Alig confidence										.																												.
Template Conservation										.
Template Sequence	Q	L	S	Q	W	F	K	E	G	.	K	L	K	I	K	E	T	V	I	N	G	L	E	N	M	G	A	A	F	Q	S	M	M	T	G	G	N	I	G	K	Q	I	V	C	I	S
Template Known Secondary structure								T	T	.		S										G	G	G										T	T			S	B						S
Template Predicted Secondary structure										.
Template SS confidence
	302	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions