Job Description P07913 Confidence 100.00% Date Thu Jan 5 11:00:39 GMT 2012 Rank 35 Aligned Residues 313 % Identity 15% Template c2j8zA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structure of human p53 inducible oxidoreductase (2 tp53i3,pig3) Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		M	K	A	L	S	K	L	K	A	E	E	G	.	.	I	W	M	T	D	V	P	V	P	E	L	G	H	N	D	L	L	I	K	I	R	K	T	A	I	C	G	T	D	V	H	I	Y	N	W	D	E	W	S	Q	K	T	I	P	V	P	M	V	V	G	H	E	Y	V	G	E	V	V	G	I	G	Q	E	V	K	G
Query Conservation														.	.
Alig confidence														.	.																																						.	.
Template Conservation																																																					.	.
Template Sequence		M	L	A	V	H	F	D	K	P	G	G	P	E	N	L	Y	V	K	E	V	A	K	P	S	P	G	E	G	E	V	L	L	K	V	A	A	S	A	L	N	R	A	D	L	M	Q	R	Q	G	Q	Y	.	.	D	P	P	P	G	A	S	N	I	L	G	L	E	A	S	G	H	V	A	E	L	G	P	G	C	Q	H
Template Known Secondary structure								S	S		S	S	G	G	G													T	T																					T	S	S	.	.				T	T	S		S	S	S		S											S			.
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	I	G	D	R	V	S	G	E	G	H	I	T	C	G	H	C	R	N	C	R	G	G	R	T	H	L	C	R	N	T	I	G	V	G	V	N	R	P	G	C	F	A	E	Y	L	V	I	P	A	F	N	A	F	K	I	P	D	N	I	S	D	D	L	A	A	I	F	D	P	F	G	N	A	V	H	T	A	L
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	K	I	G	D	T	A	M	A	L	L	P	G	G	G	Q	A	Q	Y	V	T	V	P	E	G	L	L	M	P	I	P	E	G	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	Q	A	A	A	I	P	E	A	W	L	T	A	F	Q	L	L	H	L	V
Template Known Secondary structure				T	T								S	S			S	B	S						G	G	G						T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S												T	T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																									.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	D	L	V	G	E	D	V	L	V	S	G	A	G	P	I	G	I	M	A	A	A	V	A	K	H	V	G	A	R	N	V	V	I	T	D	V	N	E	Y	R	L	E	L	A	R	K	M	G	I	T	R	A	V	N	V	A	K	E	N	L	N	D	V	M	A	E	L	G	M	T	E	G	F	D	V	G	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	V	Q	A	G	D	Y	V	L	I	H	A	G	L	S	G	V	G	T	A	A	I	Q	L	T	R	M	A	G	A	I	P	L	V	T	A	G	S	Q	K	K	L	Q	M	A	E	K	L	G	A	A	A	G	F	N	Y	K	K	E	D	F	S	E	A	T	L	K	F	T	K	G	A	G	V	N	L	I	L	D
Template Known Secondary structure		S				T	T						S	S	T	T	S													T	T								S												T		S					T	T	T	S										T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290										.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.																				.	.	.	.	.	.	.	.	.
Query SS confidence																																			.																				.	.	.	.	.	.	.	.	.
Query Sequence		M	S	G	A	P	P	A	F	R	T	M	L	D	T	M	N	H	G	G	R	I	A	M	L	G	I	P	P	S	D	M	S	I	.	D	W	T	K	V	I	F	K	G	L	F	I	K	G	I	Y	G	R	E	.	.	.	.	.	.	.	.	.	M	F	E	T	W	Y	K	M	A	A	L	I	Q	S	G	L	D	L
Query Conservation																																			.																				.	.	.	.	.	.	.	.	.
Alig confidence																																			.																				.	.	.	.	.	.	.	.	.																.
Template Conservation																																																																															.
Template Sequence		C	I	G	G	S	Y	W	E	K	N	V	N	C	L	A	L	D	G	R	W	V	L	Y	G	L	M	G	G	G	D	I	N	G	P	L	F	S	K	L	L	F	K	R	G	S	L	I	T	S	L	L	R	S	R	D	N	K	Y	K	Q	M	L	V	N	A	F	T	E	Q	I	L	P	H	F	S	T	Q	.	R	L
Template Known Secondary structure		S	S		G	G	G																				T	T		S				S									T	T								S	T	T																	T	G	G	G	G	T			.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		S	P	I	I	T	H	R	F	S	I	D	D	F	Q	K	G	F	D	A	M	R	S	G	Q	S	.	G	K	V	I	L	S	W
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		L	P	V	L	D	R	I	Y	P	V	T	E	I	Q	E	A	H	K	Y	M	E	A	N	K	N	I	G	K	I	V	L	E	L
Template Known Secondary structure											G	G	G										T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions