Return to main results Retrieve Phyre Job Id

Job DescriptionP07913
Confidence100.00%DateThu Jan 5 11:00:39 GMT 2012
Rank11Aligned Residues336
% Identity25%Templatec2eihA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:alcohol dehydrogenase; PDBTitle: crystal structure of nad-dependent alcohol dehydrogenase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1....... .10.........20.........30.........40.........50.........60.........70........
Predicted Secondary structure 

..




































Query SS confidence 







. .





































































Query Sequence  MKALSKLK. . AEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKG
Query Conservation 


 
   ..    
 
   
 
     





 
 


  
     
          
 
 
 
  
 
  

  
  
Alig confidence 







..








































..


























Template Conservation 


 
    
    
     
 
     





    

  
     
  ..      
 
 
 
  
 
  

  
  
Template Sequence  MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVA. . SPKLPLPHVLGADGSGVVDAVGPGVEG
Template Known Secondary structure 

SSSSGGG






TT

TSS..STT

SS

S
SS

S
Template Predicted Secondary structure 




















..



















Template SS confidence 















































































   1........10.........20.........30.........40.........50. ........60.........70........
 
   7980.........90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  FKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLAAIFDPFGNAVHTAL
Query Conservation    




                                    
                     
              
Alig confidence 















































































Template Conservation   





                                    
                                    
Template Sequence  FAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMV
Template Known Secondary structure 

TT




S
STT
GGG
TT
TTTSS

SSBSGGG

TTS
S
Template Predicted Secondary structure 



























































Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150........
 
   159160.... .....170.........180.........190.........200.........210.........220.........230.....
Predicted Secondary structure 




...


























Query SS confidence 





. . .






































































Query Sequence  SFDLVG. . . EDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAELGMTEGFDV
Query Conservation        ...           
                                                           
Alig confidence 





...






































































Template Conservation             
   
                                        
                       
Template Sequence  VDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADK
Template Known Secondary structure  TTTS


TT

STTSTTTT
SST
STTSTTTTTT
Template Predicted Secondary structure 





































Template SS confidence 















































































   159160.........170.........180.........190.........200.........210.........220.........230........
 
   236...240.........250.........260.........270.........280.........290.........300.........310.....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  GLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHR
Query Conservation                                                 
 
            
  
   
      
   
Alig confidence 























































.












.








Template Conservation                                                   
      .        

  
. 
   
   
Template Sequence  VVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASK. SRLFPILRFVEEG. KLKPVVGQV
Template Known Secondary structure  SS
SSSSS


S





TTTT


S

G.GGT.SS


Template Predicted Secondary structure 






















.

.





Template SS confidence 















































































   239240.........250.........260.........270.........280.........290.... .....300....... ..310......
 
   316...320.........330... ......340
Predicted Secondary structure 



.
Query SS confidence 

















.






Query Sequence  FSIDDFQKGFDAMRSGQS. GKVILSW
Query Conservation    
    

   
  
  .




  
Alig confidence 

















.






Template Conservation    

    
   
      




 
Template Sequence  LPLEAAAEGHRLLEERRVFGKVVLQV
Template Known Secondary structure  GGGTT
SSS
Template Predicted Secondary structure 






Template SS confidence 

























   317..320.........330.........340..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions