Job Description P07913 Confidence 100.00% Date Thu Jan 5 11:00:39 GMT 2012 Rank 2 Aligned Residues 339 % Identity 44% Template c2dfvB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable l-threonine 3-dehydrogenase; PDBTitle: hyperthermophilic threonine dehydrogenase from pyrococcus horikoshii Resolution 2.05 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	S	K	L	K	A	E	E	G	I	W	M	T	D	V	P	V	P	E	L	G	H	N	D	L	L	I	K	I	R	K	T	A	I	C	G	T	D	V	H	I	Y	N	W	D	E	W	S	Q	K	T	I	P	V	P	M	V	V	G	H	E	Y	V	G	E	V	V	G	I	G	Q	E	V	K	G	F	K	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	X	K	T	K	P	G	Y	G	A	E	L	V	E	V	D	V	P	K	P	G	P	G	E	V	L	I	K	V	L	A	T	S	I	C	G	T	D	L	H	I	Y	E	W	N	E	W	A	Q	S	R	I	K	P	P	Q	I	X	G	H	E	V	A	G	E	V	V	E	I	G	P	G	V	E	G	I	E	V	G
Template Known Secondary structure							S	S	S	S	S													T	T																					T										S	S																T	T			S			T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	V	S	G	E	G	H	I	T	C	G	H	C	R	N	C	R	G	G	R	T	H	L	C	R	N	T	I	G	V	G	V	N	R	P	G	C	F	A	E	Y	L	V	I	P	A	F	N	A	F	K	I	P	D	N	I	S	D	D	L	A	A	I	F	D	P	F	G	N	A	V	H	T	A	L	S	F	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	V	S	V	E	T	H	I	V	C	G	K	C	Y	A	C	R	R	G	Q	Y	H	V	C	Q	N	T	K	I	F	G	V	D	T	D	G	V	F	A	E	Y	A	V	V	P	A	Q	N	I	W	K	N	P	K	S	I	P	P	E	Y	A	T	L	Q	E	P	L	G	N	A	V	D	T	V	L	A	G	P	I
Template Known Secondary structure													S		S					T	T		G	G	G		T	T				T	T	T	T	S			S	S	B	S						G	G	G						T	T	S						T	T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	E	D	V	L	V	S	G	A	G	P	I	G	I	M	A	A	A	V	A	K	H	V	G	A	R	N	V	V	I	T	D	V	N	E	Y	R	L	E	L	A	R	K	M	G	I	T	R	A	V	N	V	A	K	E	N	L	N	D	V	M	A	E	L	G	M	T	E	G	F	D	V	G	L	E	M	S	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	K	S	V	L	I	T	G	A	G	P	L	G	L	L	G	I	A	V	A	K	A	S	G	A	Y	P	V	I	V	S	E	P	S	D	F	R	R	E	L	A	K	K	V	G	A	D	Y	V	I	N	P	F	E	E	D	V	V	K	E	V	X	D	I	T	D	G	N	G	V	D	V	F	L	E	F	S	G	A
Template Known Secondary structure		T	T									S													T	T			S						S												T		S					T	T	T	S										T	T	T	S									S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																																		.																																.													.
Query SS confidence																																		.																																.													.
Query Sequence		P	P	A	F	R	T	M	L	D	T	M	N	H	G	G	R	I	A	M	L	G	I	P	P	S	D	M	S	I	D	W	T	.	K	V	I	F	K	G	L	F	I	K	G	I	Y	G	R	E	M	F	E	T	W	Y	K	M	A	A	L	I	Q	S	G	.	L	D	L	S	P	I	I	T	H	R	F	S	.	I	D
Query Conservation																																		.																																.													.
Alig confidence																																		.																																.													.
Template Conservation
Template Sequence		P	K	A	L	E	Q	G	L	Q	A	V	T	P	A	G	R	V	S	L	L	G	L	Y	P	G	K	V	T	I	D	F	N	N	L	I	I	F	K	A	L	T	I	Y	G	I	T	G	R	H	L	W	E	T	W	Y	T	V	S	R	L	L	Q	S	G	K	L	N	L	D	P	I	I	T	H	K	Y	K	G	F	D
Template Known Secondary structure																									S	S										T	T	T	T	T								S			T	T													T					G	G	G							S	S	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	Q	K	G	F	D	A	M	R	S	G	Q	S	G	K	V	I	L	S	W	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	E	E	A	F	E	L	X	R	A	G	K	T	G	K	V	V	F	X	L	K
Template Known Secondary structure		T										T	T			S
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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