Job Description P07913 Confidence 100.00% Date Thu Jan 5 11:00:39 GMT 2012 Rank 51 Aligned Residues 312 % Identity 19% Template c1yb5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structure of human zeta-crystallin with bound nadp Resolution 1.85 Å

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		1	.	.	.	.	.	.	.			.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure										.	.								.
Query SS confidence										.	.								.
Query Sequence		M	K	A	L	S	K	L	K	.	.	A	E	E	G	I	W	M	.	T	D	V	P	V	P	E	L	G	H	N	D	L	L	I	K	I	R	K	T	A	I	C	G	T	D	V	H	I	Y	N	W	D	E	W	S	Q	K	T	I	P	V	P	M	V	V	G	H	E	Y	V	G	E	V	V	G	I	G	Q	E	V	K
Query Conservation										.	.								.
Alig confidence										.	.								.																																							.	.
Template Conservation																																																										.	.
Template Sequence		M	R	A	V	R	V	F	E	F	G	G	P	E	V	L	K	L	R	S	D	I	A	V	P	I	P	K	D	H	Q	V	L	I	K	V	H	A	C	G	V	N	P	V	E	T	Y	I	R	S	G	T	Y	S	R	K	P	.	.	L	L	P	Y	T	P	G	S	D	V	A	G	V	I	E	A	V	G	D	N	A	S
Template Known Secondary structure								S	S		S	S	G	G	G														T	T																					T		S	S				.	.		S	S	B				S											T	T		T
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	K	I	G	D	R	V	S	G	E	G	H	I	T	C	G	H	C	R	N	C	R	G	G	R	T	H	L	C	R	N	T	I	G	V	G	V	N	R	P	G	C	F	A	E	Y	L	V	I	P	A	F	N	A	F	K	I	P	D	N	I	S	D	D	L	A	A	I	F	D	P	F	G	N	A	V	H	T	A
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	K	K	G	D	R	V	F	T	S	S	T	I	S	G	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	Y	A	L	A	A	D	H	T	V	Y	K	L	P	E	K	L	D	F	K	Q	G	A	A	I	G	I	P	Y	F	T	A	Y	R	A	L	I	H
Template Known Secondary structure		T			T	T						S			S	S		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	S						G	G	G						T	T	S						T	T	T													T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																								.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	F	D	L	V	G	E	D	V	L	V	S	G	A	G	P	I	G	I	M	A	A	A	V	A	K	H	V	G	A	R	N	V	V	I	T	D	V	N	E	Y	R	L	E	L	A	R	K	M	G	I	T	R	A	V	N	V	A	K	E	N	L	N	D	V	M	A	E	L	G	M	T	E	G	F	D	V	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	C	V	K	A	G	E	S	V	L	V	H	G	A	S	G	G	V	G	L	A	A	C	Q	I	A	R	A	Y	G	L	K	I	L	G	T	A	G	T	E	E	G	Q	K	I	V	L	Q	N	G	A	H	E	V	F	N	H	R	E	V	N	Y	I	D	K	I	K	K	Y	V	G	E	K	G	I	D	I	I	I
Template Known Secondary structure		T	S				T	T							T		S	S													T	T								S	S										T	T		S					T	T	S	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.						.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																								.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.
Query Sequence		E	M	S	G	A	P	P	A	F	R	T	M	L	D	T	M	N	H	G	G	R	I	A	M	L	G	I	P	P	S	D	M	S	I	D	W	T	K	V	I	F	K	G	L	F	I	K	G	I	Y	G	R	E	M	.	.	.	.	.	F	E	T	W	Y	K	M	A	A	L	I	Q	S	G	L	D	L	S	P	I	I
Query Conservation																																																								.	.	.	.	.
Alig confidence																													.	.																										.	.	.	.	.															.
Template Conservation																													.	.																																													.
Template Sequence		E	M	L	A	N	V	N	L	S	K	D	L	S	L	L	S	H	G	G	R	V	I	V	V	G	S	R	.	.	G	T	I	E	I	N	P	R	D	T	M	A	K	E	S	S	I	I	G	V	T	L	F	S	S	T	K	E	E	F	Q	Q	Y	A	A	A	L	Q	A	G	M	E	I	G	.	W	L	K	P	V	I
Template Known Secondary structure			S																										.	.	S						T					T	T	T								G	G	G																				T	.
Template Predicted Secondary structure																													.	.																																													.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		T	H	R	F	S	I	D	D	F	Q	K	G	F	D	A	M	R	S	G	Q	S	.	.	G	K	V	I	L	S	W
Query Conservation																							.	.
Alig confidence																							.	.
Template Conservation
Template Sequence		G	S	Q	Y	P	L	E	K	V	A	E	A	H	E	N	I	I	H	G	S	G	A	T	G	K	M	I	L	L	L
Template Known Secondary structure							G	G	G											S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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