Job Description P07913 Confidence 100.00% Date Thu Jan 5 11:00:39 GMT 2012 Rank 22 Aligned Residues 333 % Identity 26% Template c1kolA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:formaldehyde dehydrogenase; PDBTitle: crystal structure of formaldehyde dehydrogenase Resolution 1.65 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.								.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.
Query Sequence		K	A	L	S	K	L	K	A	E	E	G	I	W	M	T	D	V	P	V	P	E	.	.	.	.	.	.	.	L	G	H	N	D	L	L	I	K	I	R	K	T	A	I	C	G	T	D	V	H	I	Y	N	W	D	E	W	S	Q	K	T	I	P	V	P	M	V	V	G	H	E	Y	V	G	E	V	V	G	I	G	Q
Query Conservation																							.	.	.	.	.	.	.
Alig confidence												.											.	.	.	.	.	.	.																														.	.	.	.
Template Conservation												.																																															.	.	.	.
Template Sequence		R	G	V	V	Y	L	G	S	G	K	.	V	E	V	Q	K	I	D	Y	P	K	M	Q	D	P	R	G	K	K	I	E	H	G	V	I	L	K	V	V	S	T	N	I	C	G	S	D	Q	H	M	V	R	G	R	T	T	A	.	.	.	.	Q	V	G	L	V	L	G	H	E	I	T	G	E	V	I	E	K	G	R
Template Known Secondary structure									T	T		.											S	B		T	T	S		B		S	S																				T	T		S			.	.	.	.		T	T		B														T
Template Predicted Secondary structure												.																																															.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.											.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.															.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.															.	.
Query Sequence		E	V	K	G	F	K	I	G	D	R	V	S	G	E	G	H	I	T	C	G	H	C	R	N	C	R	G	G	R	T	H	L	C	R	N	T	I	G	V	G	V	.	.	.	.	.	.	.	.	.	.	N	R	P	G	C	F	A	E	Y	L	V	I	P	A	.	.	F	N	A	F	K	I	P	D	N	I	S	D	D
Query Conservation																																											.	.	.	.	.	.	.	.	.	.															.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		D	V	E	N	L	Q	I	G	D	L	V	S	V	P	F	N	V	A	C	G	R	C	R	S	C	K	E	M	H	T	G	V	C	L	T	V	N	P	A	R	A	G	G	A	Y	G	Y	V	D	M	G	D	W	T	G	G	Q	A	E	Y	V	L	V	P	Y	A	D	F	N	L	L	K	L	P	D	R	D	K	A	M
Template Known Secondary structure		T			S			T	T							S					S	S	S					T	T		G	G	G		S	S	S		S	S	S	S				B	T		T	T	S			B				S	B	S					S	S									S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		L	A	A	I	F	D	P	F	G	N	A	V	H	T	A	L	S	F	.	.	.	.	.	.	D	L	V	G	E	D	V	L	V	S	G	A	G	P	I	G	I	M	A	A	A	V	A	K	H	V	G	A	R	N	V	V	I	T	D	V	N	E	Y	R	L	E	L	A	R	K	M	G	I	T	R	A	V	N	V	A
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	I	R	D	L	T	C	L	S	D	I	L	P	T	G	Y	H	G	A	V	T	A	G	V	G	P	G	S	T	V	Y	V	A	G	A	G	P	V	G	L	A	A	A	A	S	A	R	L	L	G	A	A	V	V	I	V	G	D	L	N	P	A	R	L	A	H	A	K	A	Q	G	F	E	I	A	D	L	S	L
Template Known Secondary structure			T					G	G	G	G	T												T	T			T	T									S													T	T		S							S											T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.																.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	E	N	L	N	D	V	M	A	E	L	G	M	T	E	G	F	D	V	G	L	E	M	S	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	A	F	R	T	M	L	D	T	M	N	H	G	G	R	I	A	M	L	G	I	P	P	S	D	M	S	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	P	L	H	E	Q	I	A	A	L	L	G	E	P	E	V	D	C	A	V	D	A	V	G	F	E	A	R	G	H	G	H	E	G	A	K	H	E	A	P	A	T	V	L	N	S	L	M	Q	V	T	R	V	A	G	K	I	G	I	P	G	L	Y	V	T	E	D	P	G	A	V	D	A	A	A	K	I	G	S
Template Known Secondary structure		S	S											S	S	S											T	T		B		S	S	T	T	G	G	G	S	B		T	T																				S				S			T	T		S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
				271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.				.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure		.	.																																										.	.	.
Query SS confidence		.	.																																										.	.	.
Query Sequence		.	.	I	D	W	T	K	V	I	F	K	G	L	F	I	K	G	I	Y	G	R	E	M	F	E	T	W	Y	K	M	A	A	L	I	Q	S	G	L	D	L	S	P	I	.	.	.	I	T	H	R	F	S	I	D	D	F	Q	K	G	F	D	A	M	R	S	G	Q	S	G	K	V	I	L	S	W	D
Query Conservation		.	.																																										.	.	.
Alig confidence		.	.																	.																			.						.	.	.
Template Conservation																				.																			.
Template Sequence		L	S	I	R	F	G	L	G	W	A	K	S	H	S	F	H	T	G	.	Q	T	P	V	M	K	Y	N	R	A	L	M	Q	A	I	M	W	D	.	R	I	N	I	A	E	V	V	G	V	Q	V	I	S	L	D	D	A	P	R	G	Y	G	E	F	D	A	G	V	P	K	K	F	V	I	D	P	H
Template Known Secondary structure												T	T						S	.	S																T	T	.	S								T						G	G	G											T		S							T	T
Template Predicted Secondary structure																				.																			.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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