Job Description P0A6B4 Confidence 99.79% Date Thu Jan 5 11:02:45 GMT 2012 Rank 48 Aligned Residues 175 % Identity 16% Template d1twia2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.00

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																							.																														.
Query SS confidence																							.																														.
Query Sequence		T	V	V	I	N	R	R	A	L	R	H	N	L	Q	R	L	R	E	L	A	P	.	A	S	K	M	V	A	V	V	K	A	N	A	Y	G	H	G	L	L	E	T	A	R	T	L	P	D	A	D	A	.	F	G	V	A	R	L	E	E	A	L	R	L	R	A	G	G	I	T	K	P	V	L	L	L	E	G	F	F
Query Conservation																							.																														.
Alig confidence																							.													.	.	.	.														.
Template Conservation																																				.	.	.	.
Template Sequence		Q	I	K	I	N	Y	N	R	Y	I	E	A	F	K	R	W	E	E	E	T	G	K	E	F	I	V	A	Y	A	Y	K	A	N	A	.	.	.	.	N	L	A	I	T	R	L	L	A	K	L	G	C	G	A	D	V	V	S	G	G	E	L	Y	I	A	K	L	S	N	V	P	S	K	K	I	V	F	N	G	N	C
Template Known Secondary structure																						S									G	G	G			.	.	.	.											T	T							S										T	T			G	G	G						S	S
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
			83	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.															.	130	.	.	.	.	.	.			.	.	.	140	.	.
Predicted Secondary structure		.														.																			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query SS confidence		.														.																			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query Sequence		.	D	A	R	D	L	P	T	I	S	A	Q	H	F	.	H	T	A	V	H	N	E	E	Q	L	A	A	L	E	E	A	S	L	.	.	D	E	P	V	T	V	W	M	K	L	D	T	G	M	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	G	V	R	P	E	Q	.	.	A	E	A	F	Y	H
Query Conservation		.														.																			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Alig confidence		.														.																			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation
Template Sequence		K	T	K	E	E	I	I	M	G	I	E	A	N	I	R	A	F	N	V	D	S	I	S	E	L	I	L	I	N	E	T	A	K	E	L	G	E	T	A	N	V	A	F	R	I	N	P	N	V	N	P	K	T	H	P	K	I	S	T	G	L	K	K	N	K	F	G	L	D	V	E	S	G	I	A	M	K	A	I	K
Template Known Secondary structure													T	T		S						S															T															T	T	T											S	S		S			S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	T	Q	C	K	N	V	R	Q	P	V	N	I	V	S	H	F	A	R	A	D	E	P	K	C	G	A	T	E	K	Q	L	A	I	F	N	T	F	C	E	G	K
Query Conservation
Alig confidence										.													.
Template Conservation										.													.
Template Sequence		M	A	L	E	M	E	Y	V	.	N	V	V	G	V	H	C	H	I	G	S	Q	.	L	T	D	I	S	P	F	I	E	E	T	R	K	V	M	D	F	V	V	E	L
Template Known Secondary structure							S	S		.											S	S	.	B			S
Template Predicted Secondary structure										.													.
Template SS confidence
		209	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions