Job Description P0A6B4 Confidence 99.83% Date Thu Jan 5 11:02:45 GMT 2012 Rank 45 Aligned Residues 171 % Identity 15% Template d1hkva2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.6

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																			.																														.																			.
Query SS confidence																			.																														.																			.
Query Sequence		N	R	R	A	L	R	H	N	L	Q	R	L	R	E	L	A	P	.	A	S	K	M	V	A	V	V	K	A	N	A	Y	G	H	G	L	L	E	T	A	R	T	L	P	D	A	D	A	.	F	G	V	A	R	L	E	E	A	L	R	L	R	A	G	G	I	T	.	K	P	V	L	L	L	E	G	F	F	D	A	R
Query Conservation																			.																														.																			.
Alig confidence																			.													.	.	.	.														.																			.
Template Conservation																																.	.	.	.
Template Sequence		D	E	D	D	F	R	S	R	C	R	E	T	A	A	A	F	G	S	G	A	N	V	H	Y	A	A	K	A	F	L	.	.	.	.	C	S	E	V	A	R	W	I	S	E	E	G	L	C	L	D	V	C	T	G	G	E	L	A	V	A	L	H	A	S	F	P	P	E	R	I	T	L	H	G	N	N	K	S	V	S
Template Known Secondary structure																	T	T	S	G	G	G	B				G	G	G	S		.	.	.	.												T							S										T	T			G	G	G						S	S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		86	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.															.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.
Predicted Secondary structure												.																			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence												.																			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		D	L	P	T	I	S	A	Q	H	F	.	H	T	A	V	H	N	E	E	Q	L	A	A	L	E	E	A	S	L	.	.	D	E	P	V	T	V	W	M	K	L	D	T	G	M	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	G	V	R	P	E	Q	A	E	A	F	.	.	Y	H	R	L	T	Q
Query Conservation												.																			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence												.																			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		E	L	T	A	A	V	K	A	G	V	G	H	I	V	V	D	S	M	T	E	I	E	R	L	D	A	I	A	G	E	A	G	I	V	Q	D	V	L	V	R	L	T	V	G	V	E	A	H	T	H	E	F	I	S	T	A	H	E	D	Q	K	F	G	L	S	V	A	S	G	A	A	M	A	A	V	R	R	V	F	A
Template Known Secondary structure										T								S															T												S						T						S	S			S	S	S	S			S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	K	N	V	R	Q	P	V	N	I	V	S	H	F	A	R	A	D	E	P	K	C	G	A	T	E	K	Q	L	A	I	F	N	T	F	C	E	G	K
Query Conservation
Alig confidence						.													.
Template Conservation						.													.
Template Sequence		T	D	H	L	.	R	L	V	G	L	H	S	H	I	G	S	Q	.	I	F	D	V	D	G	F	E	L	A	A	H	R	V	I	G	L	L	R	D	V
Template Known Secondary structure			S	S		.													.				S
Template Predicted Secondary structure						.													.
Template SS confidence
		202	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions