Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6B4
Confidence100.00%DateThu Jan 5 11:02:45 GMT 2012
Rank20Aligned Residues131
% Identity31%Templated1bd0a1
SCOP infoDomain of alpha and beta subunits of F1 ATP synthase-like Alanine racemase C-terminal domain-like Alanine racemase
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   226...230.........240.........250.........260.........270.........280.........290.........300.....
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  GADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMDM
Query Conservation       
 
   
 
 
  
  
  
  



          

 
 


 

  
       
 
 
    


 
 

 
Alig confidence 


























































.



















Template Conservation   
   
 

 

 
 
  

 
  
  



    
     

 
 





  
  
 .  


 
   





 

 
Template Sequence  DFHRDTWAEFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRLQH. FHVLVDGQKAPIVGRICMDQ
Template Known Secondary structure 


SS



S
TT
SGGG


SSS

GGGT

GGGGG.
TTS


SS
Template Predicted Secondary structure 





























.









Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60. ........70.........80.
 
   306...310.........320...... ...330.........340.........350.........
Predicted Secondary structure 











....

















Query SS confidence 




















. . . .
































Query Sequence  ICVDLGPQAQDKAGDPVILWG. . . . EGLPVERIAEMTKVSAYELITRLTSRVAMKYVD
Query Conservation    


       


 
 
 
....   
    
    

 

 
  
  

 
 

 
Alig confidence 






..











....
































Template Conservation    



 .. 
  

 
 
 
       
    
   


 



  
  



 
  
Template Sequence  CMIRLPG. . PLPVGTKVTLIGRQGDEVISIDDVARHLETINYEVPCTISYRVPRIFFR
Template Known Secondary structure 
SS..


TT
TT
TS
TTS
TTS
Template Predicted Secondary structure 


..



























Template SS confidence 

























































   315....320. ........330.........340.........350.........360.........370
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions