Job Description P0A6B4 Confidence 99.59% Date Thu Jan 5 11:02:45 GMT 2012 Rank 50 Aligned Residues 179 % Identity 13% Template c3nzpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:arginine decarboxylase; PDBTitle: crystal structure of the biosynthetic arginine decarboxylase spea from2 campylobacter jejuni, northeast structural genomics consortium target3 br53 Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.											.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Query Sequence		Q	A	A	T	V	V	I	N	R	R	A	L	R	H	N	L	Q	R	L	R	E	L	A	.	.	.	.	.	.	.	.	.	.	P	A	S	K	M	V	A	V	V	K	A	N	A	Y	G	H	G	L	L	E	T	A	R	T	L	P	D	A	D	.	.	.	.	.	A	F	G	V	A	R	L	E	E	A	L	R	L
Query Conservation																									.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.														.	.	.	.													.	.	.	.	.
Template Conservation																																																.	.	.	.
Template Sequence		K	G	P	L	L	L	R	F	P	H	L	I	Q	K	Q	I	E	N	I	Y	G	N	F	N	K	A	R	K	E	F	G	Y	K	G	G	F	N	A	V	Y	P	L	K	V	N	Q	.	.	.	.	Y	P	G	F	V	K	N	L	V	K	L	G	K	D	Y	N	Y	G	L	E	A	G	S	K	A	E	L	L	L	A
Template Known Secondary structure			S																												T	T			S								G	G	G			.	.	.	.												T	G	G	G	T							S
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.																						.	.	.
Query SS confidence																												.	.	.	.	.																						.	.	.
Query Sequence		R	A	G	G	I	T	K	P	V	L	L	L	E	G	F	F	D	A	R	D	L	P	T	I	S	A	.	.	.	.	.	Q	H	F	H	T	A	V	H	N	E	E	Q	L	A	A	L	E	E	A	S	L	.	.	.	D	E	P	V	T	V	W	M	K	L	D	T	G	M	H	R	L	G	V	R	P	E	Q	A	E
Query Conservation																												.	.	.	.	.																						.	.	.
Alig confidence																												.	.	.	.	.																						.	.	.
Template Conservation
Template Sequence		X	A	Y	N	N	E	G	A	P	I	T	V	N	G	F	K	D	R	E	L	I	N	I	G	F	I	A	A	E	X	G	H	N	I	T	L	T	I	E	G	L	N	E	L	E	A	I	I	D	I	A	K	E	R	F	K	P	K	P	N	I	G	L	R	V	R	L	H	S	A	K	F	G	L	T	S	T	E	L	I
Template Known Secondary structure					S		T	T	S						S																T	T								S	S												T	T	S		S									B			T	T				S	B
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	Y	H	R	L	T	Q	C	K	N	V	R	Q	P	V	N	I	V	S	H	F	A	R	A	D	E	P	K	C	G	A	T	E	K	Q	L	A	I	F	N	T	F	C	E	G	K
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		E	A	V	N	L	L	K	E	N	K	L	L	E	Q	F	T	X	I	H	F	H	L	G	S	Q	.	I	T	E	I	H	P	L	K	K	A	L	N	E	A	G	N	I	Y	T	E	L
Template Known Secondary structure										T	T		T	T	T										S		.	B			S
Template Predicted Secondary structure																											.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions