Job Description P0A6B4 Confidence 99.48% Date Thu Jan 5 11:02:45 GMT 2012 Rank 52 Aligned Residues 180 % Identity 12% Template c3n2oA_ PDB info PDB header:lyase Chain: A: PDB Molecule:biosynthetic arginine decarboxylase; PDBTitle: x-ray crystal structure of arginine decarboxylase complexed with2 arginine from vibrio vulnificus Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.											.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.									.	.	.	.	.	.	60	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Query Sequence		M	Q	A	A	T	V	V	I	N	R	R	A	L	R	H	N	L	Q	R	L	R	E	L	A	P	A	S	.	.	.	.	.	.	.	.	.	.	K	M	V	A	V	V	K	A	N	A	Y	G	H	G	L	L	E	T	A	R	T	L	P	D	A	D	.	.	.	.	.	.	.	.	A	F	G	V	A	R	L	E	E
Query Conservation																													.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.											.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.
Template Sequence		L	N	V	P	V	L	V	R	F	P	Q	I	L	H	Q	R	V	H	S	I	C	D	A	F	N	Q	A	I	E	E	Y	Q	Y	P	N	K	Y	L	L	V	Y	P	I	K	V	N	Q	.	.	.	.	Q	R	E	V	V	D	E	I	L	A	S	Q	A	Q	L	E	T	K	Q	L	G	L	E	A	G	S	K	P	E
Template Known Secondary structure				S	S																												T		S	S								G	G	G			.	.	.	.															S	T	T									S
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		63	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure													.																					.	.	.	.	.																				.	.																.	.	.	.	.	.	.
Query SS confidence													.																					.	.	.	.	.																				.	.																.	.	.	.	.	.	.
Query Sequence		A	L	R	L	R	A	G	G	I	T	K	.	P	V	L	L	L	E	G	F	F	D	A	R	D	L	P	T	I	S	A	Q	.	.	.	.	.	H	F	H	T	A	V	H	N	E	E	Q	L	A	A	L	E	E	A	S	.	.	L	D	E	P	V	T	V	W	M	K	L	D	T	G	M	.	.	.	.	.	.	.
Query Conservation													.																					.	.	.	.	.																				.	.																.	.	.	.	.	.	.
Alig confidence													.																					.	.	.	.	.																				.	.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	A	V	L	A	M	A	Q	H	A	S	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	L	G	H	K	V	F	I	V	L	E	K	M	S	E	L	D	L	V	L	R	E	A	K	S	L	G	V	T	P	R	L	G	I	R	I	R	L	A	S	Q	G	A	G	K	W	Q
Template Known Secondary structure									T	S	S	S								S																T	T									S	T														T									B			S	T	T	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
								128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	H	R	L	G	V	R	P	E	Q	A	E	A	F	Y	H	R	L	T	Q	C	K	N	V	R	Q	P	V	N	I	V	S	H	F	A	R	A	D	E	P	K	C	G	A	T	E	K	Q	L	A	I	F	N	T	F	C	E	G	K
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																					.
Template Conservation																																												.
Template Sequence		A	S	G	G	E	K	S	K	F	G	L	S	A	S	Q	V	L	N	V	I	S	R	L	K	K	E	N	Q	L	D	T	L	Q	L	V	H	F	H	L	G	S	Q	.	M	A	N	I	R	D	V	R	N	G	V	N	E	S	A	R	F	Y	C	E	L
Template Known Secondary structure		S	S	S	S							B															T	T		G	G	G										S	S	.	B
Template Predicted Secondary structure																																												.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions