Job Description P0A6B4 Confidence 100.00% Date Thu Jan 5 11:02:45 GMT 2012 Rank 9 Aligned Residues 351 % Identity 29% Template c3hurA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from oenococcus oeni Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.
Query SS confidence																																																			.	.	.
Query Sequence		Q	A	A	T	V	V	I	N	R	R	A	L	R	H	N	L	Q	R	L	R	E	L	A	P	A	S	K	M	V	A	V	V	K	A	N	A	Y	G	H	G	L	L	E	T	A	R	T	L	P	.	.	.	D	A	D	A	F	G	V	A	R	L	E	E	A	L	R	L	R	A	G	G	I	T	K	P	V	L	L	L
Query Conservation																																																			.	.	.
Alig confidence																																																			.	.	.
Template Conservation
Template Sequence		R	P	T	W	V	S	V	D	L	D	A	A	A	H	N	L	Q	E	I	R	E	W	T	K	A	K	K	V	Y	A	V	L	K	A	D	G	Y	G	L	G	A	I	P	L	A	K	A	F	Q	E	T	A	S	A	D	A	L	I	V	S	N	L	D	E	A	L	E	L	R	Q	A	D	L	T	L	P	I	W	V	L
Template Known Secondary structure																									T		S													T												T	T			S					S											T	T			S					S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		E	G	F	F	D	A	R	D	L	P	T	I	S	A	Q	H	F	H	T	A	V	H	N	E	E	Q	L	A	A	L	E	E	A	S	L	D	E	P	V	T	V	W	M	K	L	D	T	G	M	H	R	L	G	V	R	P	.	E	Q	A	E	A	F	Y	H	R	L	T	Q	C	K	N	V	R	Q	P	V	N	I	V
Query Conservation																																																										.
Alig confidence		.																																	.	.																						.																	.
Template Conservation		.																																	.	.																																							.
Template Sequence		.	G	A	W	D	Y	S	D	L	K	L	F	I	D	H	D	I	V	I	T	I	P	S	L	A	W	L	Q	N	L	P	D	F	.	.	E	G	T	L	K	V	S	L	A	I	D	T	G	M	T	R	I	G	F	D	K	A	D	E	I	S	A	A	K	K	I	I	D	K	N	P	Q	L	.	D	L	F	S	V	Y
Template Known Secondary structure		.	S				G	G	G							T	T													T					.	.	S	S								B			S	S		S	S	S	B																	T	T		.
Template Predicted Secondary structure		.																																	.	.																																							.
Template SS confidence
			87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.
		158	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.
Predicted Secondary structure											.	.	.																				.	.	.																.	.	.																						.
Query SS confidence											.	.	.																				.	.	.																.	.	.																						.
Query Sequence		S	H	F	A	R	A	D	E	P	.	.	.	K	C	G	A	T	E	K	Q	L	A	I	F	N	T	F	C	E	G	K	.	.	.	P	G	Q	R	S	I	A	A	S	G	G	I	L	L	W	.	.	.	P	Q	S	H	F	D	W	V	R	P	G	I	I	L	Y	G	V	S	P	L	E	.	D	R	S	T	G	A
Query Conservation											.	.	.																				.	.	.																.	.	.																						.
Alig confidence											.	.	.																				.	.	.																.	.	.																						.
Template Conservation
Template Sequence		T	H	F	A	T	A	D	E	A	G	E	K	S	K	A	Y	F	E	E	Q	L	R	R	W	Q	E	L	T	I	N	Q	G	F	D	P	S	L	F	S	M	A	N	S	A	T	C	I	W	H	H	D	D	P	R	I	S	F	A	A	I	R	P	G	Q	L	I	S	G	V	N	V	S	N	G	E	L	K	M	P	P
Template Known Secondary structure					T	T	T	T	S		S																			T	T	S				G	G	G												T	T	T		T	T	S			S						G	G	G	G	T			T	T	T	T	S	S				T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	G	C	Q	P	V	M	S	L	T	S	S	L	I	A	V	R	E	H	K	A	G	E	P	V	G	Y	G	G	T	W	V	S	E	R	D	T	R	L	G	V	V	A	M	G	Y	G	D	G	Y	P	R	A	A	P	S	G	T	P	V	L	V	N	G	R	E	V	P	I	V	G	R	V	A	M	D	M	I	C
Query Conservation
Alig confidence																																																									.
Template Conservation																																																									.
Template Sequence		N	L	H	L	E	R	I	F	S	V	C	S	E	I	A	D	V	R	F	V	K	K	D	Q	S	L	S	Y	G	A	S	E	R	M	P	E	D	G	Y	V	A	T	L	P	F	G	Y	N	D	G	W	L	R	R	M	.	Q	K	S	S	V	I	I	N	G	K	R	M	P	I	I	G	R	I	T	M	D	Q	T	M
Template Known Secondary structure		T																					T	T		B	S	S	T	T		S		B		S	S	S							S			T	T		G	G	G	G	G		.								T	T					B		S				S	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		V	D	L	G	P	Q	A	Q	D	K	A	G	D	P	V	I	L	W	G	E	G	.	.	.	.	L	P	V	E	R	I	A	E	M	T	K	V	S	A	Y	E	L	I	T	R	L	T	S	R	V	A	M	K	Y	V	D
Query Conservation																							.	.	.	.
Alig confidence							.	.															.	.	.	.
Template Conservation							.	.
Template Sequence		V	K	L	D	R	.	.	K	Y	P	I	G	T	R	V	T	L	I	G	K	D	G	G	E	Q	I	T	V	E	E	V	A	N	Y	S	H	T	I	V	D	E	I	Q	T	T	L	A	P	R	I	K	R	I	Y	T	G
Template Known Secondary structure					S	S	.	.				T	T								S	S	T	T			S									S	S										S		T	T	S						S
Template Predicted Secondary structure							.	.
Template SS confidence
		322	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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