Job Description P0A6B4 Confidence 100.00% Date Thu Jan 5 11:02:45 GMT 2012 Rank 10 Aligned Residues 333 % Identity 27% Template c3co8B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from oenococcus oeni Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		Q	A	A	T	V	V	I	N	R	R	A	L	R	H	N	L	Q	R	L	R	E	L	A	P	A	S	K	M	V	A	V	V	K	A	N	A	Y	G	H	G	L	L	E	T	A	R	T	L	.	.	P	D	A	D	A	F	G	V	A	R	L	E	E	A	L	R	L	R	A	G	G	I	T	K	P	V	L	L	L	E
Query Conservation																																																		.	.
Alig confidence																																																		.	.																														.
Template Conservation																																																																																	.
Template Sequence		R	S	T	R	I	E	F	S	K	S	S	L	A	Y	N	V	Q	Y	T	K	Q	V	S	G	A	K	T	L	W	L	A	V	K	S	N	A	Y	G	H	G	L	L	Q	V	S	K	I	A	R	E	C	G	V	D	G	L	A	V	S	V	L	D	E	G	I	A	I	R	Q	A	G	I	D	D	F	I	L	I	L	.
Template Known Secondary structure																											S												T	T									T	T	T	T	T							S	S										T	T			S						.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		G	F	F	D	A	R	D	L	P	T	I	S	A	Q	H	F	H	T	A	V	H	N	E	E	Q	L	A	A	L	E	E	A	S	L	D	E	P	V	T	V	W	M	K	L	D	T	G	M	H	R	L	G	V	.	R	P	E	Q	A	E	A	F	Y	H	R	L	T	Q	C	K	N	V	R	Q	P	V	N	I	V	S
Query Conservation																																																							.
Alig confidence																																																							.
Template Conservation
Template Sequence		G	P	I	D	V	K	Y	A	P	I	A	S	K	Y	H	F	L	T	T	V	S	S	L	D	W	L	K	S	A	D	K	I	L	G	K	E	K	L	S	V	N	L	A	V	D	T	G	X	N	R	I	G	V	R	S	K	K	D	L	K	D	E	I	E	F	L	Q	E	H	S	D	H	F	S	Y	D	G	I	F	T
Template Known Secondary structure		S				G	G	G							T	T																T	T		T	T									B		S	S	S		S	S	S	B		S														T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																													.	.																		.	.	.
Query SS confidence																													.	.																		.	.	.
Query Sequence		H	F	A	R	A	D	E	P	K	C	G	A	T	E	K	Q	L	A	I	F	N	T	F	C	E	G	K	.	.	P	G	Q	R	S	I	A	A	S	G	G	I	L	L	W	P	Q	.	.	.	S	H	F	D	W	V	R	P	G	I	I	L	Y	G	V	S	P	L	E	D	R	S	T	G	A	D	F	G	C	Q	P
Query Conservation																													.	.																		.	.	.
Alig confidence																													.	.																		.	.	.																											.
Template Conservation																																																																													.
Template Sequence		H	F	A	S	S	D	N	P	D	D	H	Y	F	Q	R	Q	K	N	R	W	Y	E	L	I	D	G	L	I	X	P	R	Y	V	H	V	X	N	S	G	A	A	X	Y	H	S	K	E	L	P	G	C	N	S	I	A	R	V	G	T	V	V	Y	G	V	E	P	S	E	G	V	L	G	P	I	D	.	K	L	K	P
Template Known Secondary structure				S	S	T	T		S																	T	T	S				S					B								S	G	G	G		T	T	S		S					S	T	T	T	T	T			T	T	S	S	S	S	S		S	T	.	T	S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	S	L	T	S	S	L	I	A	V	R	E	H	K	A	G	E	P	V	G	Y	G	G	T	W	V	S	E	R	D	T	R	L	G	V	V	A	M	G	Y	G	D	G	Y	P	R	A	A	P	S	G	T	P	V	L	V	N	G	R	E	V	P	I	V	G	R	V	A	M	D	M	I	C	V	D	L	G	P	Q
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																												.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																												.
Template Sequence		V	F	E	L	K	S	A	L	T	F	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	W	I	G	T	L	P	I	G	Y	G	D	G	W	L	A	E	Y	Q	D	.	F	Q	L	L	I	D	G	Q	K	C	R	Q	V	G	Q	I	A	X	D	Q	X	X	V	A	L	P	H	.
Template Known Secondary structure										S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S			G	G	G	T			G	G	G	T	T	.						T	T							S				S	S							S	S	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																												.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.																				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		A	Q	D	K	A	G	D	P	V	I	L	W	G	E	G	.	.	.	.	L	P	V	E	R	I	A	E	M	T	K	V	S	A	Y	E	L	I	T	R	L	T	S	R	V	A	M	K	Y	V
Query Conservation																	.	.	.	.
Alig confidence		.															.	.	.	.
Template Conservation		.
Template Sequence		.	E	Y	P	I	G	T	E	V	T	L	I	G	K	S	G	K	Y	E	N	T	L	Y	D	L	H	K	H	S	G	V	P	P	W	K	I	T	V	A	F	S	D	R	L	K	R	X	V	V
Template Known Secondary structure		.				T	T										T	T													S									T	S		T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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