Job Description P0A6B4 Confidence 99.92% Date Thu Jan 5 11:02:45 GMT 2012 Rank 40 Aligned Residues 282 % Identity 15% Template c3btnA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:antizyme inhibitor 1; PDBTitle: crystal structure of antizyme inhibitor, an ornithine2 decarboxylase homologous protein Resolution 2.05 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		A	A	T	V	V	I	N	R	R	A	L	R	H	N	L	Q	R	L	R	E	L	A	P	A	S	K	M	V	A	V	V	K	A	N	A	Y	G	H	G	L	L	E	T	A	R	T	L	P	D	A	D	A	.	F	G	V	A	R	L	E	E	A	L	R	L	R	A	G	G	I	T	K	P	V	L	L	L	E	G	F
Query Conservation																																																						.
Alig confidence																																					.	.	.	.														.
Template Conservation																																					.	.	.	.
Template Sequence		N	A	F	F	V	G	D	L	G	K	I	V	K	K	H	S	Q	W	Q	T	V	V	A	Q	I	K	P	F	Y	T	V	K	C	N	S	.	.	.	.	T	P	A	V	L	E	I	L	A	A	L	G	T	G	F	A	C	S	S	K	N	E	M	A	L	V	Q	E	L	G	V	S	P	E	N	I	I	F	T	S	P
Template Known Secondary structure																								T	T							G	G	G			.	.	.	.												T						S	S										T	T			G	G	G						S
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		82		.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.														.
Query SS confidence			.														.
Query Sequence		F	.	D	A	R	D	L	P	T	I	S	A	Q	H	F	.	H	T	A	V	H	N	E	E	Q	L	A	A	L	E	E	A	S	L	D	E	P	V	T	V	W	M	K	L	D	T	G	M	H	R	L	G	V	R	P	E	Q	A	E	A	F	Y	H	R	L	T	Q	C	K	N	V	R	Q	P	V	N	I	V	S	H
Query Conservation			.														.
Alig confidence			.														.																				.	.																															.				.
Template Conservation																																					.	.																															.				.
Template Sequence		C	K	Q	V	S	Q	I	K	Y	A	A	K	V	G	V	N	I	M	T	C	D	N	E	I	E	L	K	K	I	A	R	N	H	P	N	.	.	A	K	V	L	L	H	I	A	T	E	D	M	K	F	G	T	T	L	K	N	C	R	H	L	L	E	C	A	K	E	.	L	D	V	.	Q	I	I	G	V	K	F	H
Template Known Secondary structure		S													T								S												T	T	.	.							B									B															.		T		.
Template Predicted Secondary structure																																					.	.																															.				.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.		.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																							.	.	.	210	.	.	.	.
Predicted Secondary structure																									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	R	A	D	E	P	K	C	G	A	T	E	K	Q	L	A	I	F	N	T	F	C	.	.	.	E	G	K	P	G	Q	R	S	I	A	A	S	G	G	I	L	L	W	P	Q	S	H	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	V	R	P	G	I	I	L
Query Conservation																									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																			.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		V	S	S	A	.	C	K	E	Y	Q	V	Y	V	H	A	L	S	D	A	R	C	V	F	D	M	A	G	E	F	G	F	T	M	N	M	L	D	I	G	G	G	F	T	G	T	E	I	Q	L	E	E	V	N	H	V	I	S	P	L	L	D	I	Y	F	P	E	G	S	G	I	Q	I	I	S	E	P	G	S	Y	Y
Template Known Secondary structure				T	T	.				T	T																			T	T										S				S																				S		T	T	S									S
Template Predicted Secondary structure						.
Template SS confidence
		198	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	V	S	P	L	E	D	R	S	T	G	A	D	F	G	C	Q	P	V	M	S	L	T	S	S	L	I	A	V	R	E	H	K	A	G	E	P	V	G	Y	G	G	T	W	V	S	E	R	D	T	R	L	G	V	V	A	M	G	Y	G	D	G	Y	P	R	A	A	P	S	G	T	P	V	L	V	N	G	R	E
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	F	T	L	A	V	N	I	I	A	K	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	F	V	Y	Y	M	N	D	G	V	Y	G	S	F	A	S	K	L	S	T	I	P	E	V	H	K	K	P	L	F	T
Template Known Secondary structure			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S			T	T	T	T	T	G	G	G	G
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		277	.																	.	280	.	.	.	.	.	.	.	.	.	290	.	.																	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		295	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		V	P	I	V	G	R	V	A	M	.	.	D	M	I	C	V	D	L	G	P	Q	A	Q	D	K	A	G	D	P	V	I	L	W	G
Query Conservation											.	.
Alig confidence											.	.									.
Template Conservation																					.
Template Sequence		S	S	L	W	G	P	S	C	D	E	L	D	Q	I	V	E	S	C	L	.	L	P	E	L	N	V	G	D	W	L	I	F	D	N
Template Known Secondary structure							T	T		S	T	T									.						T	T						S	S
Template Predicted Secondary structure																					.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions