Job Description P0A6B4 Confidence 100.00% Date Thu Jan 5 11:02:45 GMT 2012 Rank 21 Aligned Residues 303 % Identity 18% Template c3anuA_ PDB info PDB header:lyase Chain: A: PDB Molecule:d-serine dehydratase; PDBTitle: crystal structure of d-serine dehydratase from chicken kidney Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																											.	.																														.	.
Query SS confidence																											.	.																														.	.
Query Sequence		M	Q	A	A	T	V	V	I	N	R	R	A	L	R	H	N	L	Q	R	L	R	E	L	A	P	.	.	A	S	K	M	V	A	V	V	K	A	N	A	Y	G	H	G	L	L	E	T	A	R	T	L	P	D	A	D	A	.	.	F	G	V	A	R	L	E	E	A	L	R	L	R	A	G	G	I	T	K	P	V	L
Query Conservation																											.	.																														.	.
Alig confidence																											.	.											.	.	.	.																.	.																			.
Template Conservation																																							.	.	.	.																																				.
Template Sequence		L	P	T	P	A	L	T	I	D	R	T	T	A	R	R	N	A	E	R	M	R	E	R	C	R	A	L	G	V	R	L	R	P	H	V	K	T	.	.	.	.	H	K	T	L	E	G	G	L	L	A	T	G	G	T	R	R	G	I	A	V	S	T	L	A	E	A	R	F	F	A	D	G	G	F	D	.	D	I	L
Template Known Secondary structure		S		S	S																								T						B		T	T	.	.	.	.	T										T	T	T								S	S										T	T			.
Template Predicted Secondary structure																																							.	.	.	.																																				.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.
Predicted Secondary structure																			.	.	.	.																					.	.																																		.	.
Query SS confidence																			.	.	.	.																					.	.																																		.	.
Query Sequence		L	L	E	G	F	F	D	A	R	D	L	P	T	I	S	A	Q	.	.	.	.	H	F	H	T	A	V	H	N	E	E	Q	L	A	A	L	E	E	A	S	L	.	.	D	E	P	V	T	V	W	M	K	L	D	T	G	M	H	R	L	G	V	R	P	E	Q	A	E	A	F	Y	H	R	L	T	Q	.	.	C	K
Query Conservation																			.	.	.	.																					.	.																																		.	.
Alig confidence																			.	.	.	.																					.	.																																		.	.
Template Conservation
Template Sequence		L	A	Y	P	V	P	T	A	R	L	E	E	C	A	G	L	A	R	R	L	D	A	F	H	V	L	L	D	R	P	E	A	L	A	S	L	R	Q	R	P	L	G	H	G	K	R	W	L	V	W	L	K	L	D	C	G	R	A	G	V	R	P	T	D	P	A	A	L	E	L	A	Q	A	I	A	N	D	A	P	E
Template Known Secondary structure								G	G	G											S	S																	T	S				T	T														S	S	B		T	T	S													S		T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																										.	.	.	.	.	.																		.	.
Query SS confidence														.	.	.	.																										.	.	.	.	.	.																		.	.
Query Sequence		N	V	R	Q	P	V	N	I	V	S	H	F	.	.	.	.	A	R	A	D	E	P	K	C	G	A	T	E	K	Q	L	A	I	F	N	T	F	C	E	G	K	.	.	.	.	.	.	P	G	Q	R	S	I	A	A	S	G	G	I	L	L	W	P	Q	.	.	S	H	F	D	W	V	R	P	G	I	I	L	Y	G
Query Conservation														.	.	.	.																										.	.	.	.	.	.																		.	.
Alig confidence				.										.	.	.	.																										.	.	.	.	.	.																		.	.
Template Conservation				.
Template Sequence		E	V	.	T	L	V	G	V	Y	A	H	C	G	N	T	Y	C	S	G	A	D	T	I	Q	A	I	A	R	T	T	T	N	A	V	L	S	F	V	A	A	L	R	Q	A	G	V	P	C	P	Q	A	S	I	G	S	T	P	S	C	S	H	P	I	P	E	M	S	Q	L	T	E	L	H	P	G	N	Y	I	F	Y
Template Known Secondary structure		T		.										G	G	G				S																									T	T																S			G	G	G	G	G	S	S						G	G	G	T
Template Predicted Secondary structure				.
Template SS confidence
		167	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		V	S	P	L	E	D	R	S	T	G	A	D	F	G	C	Q	P	V	M	S	L	T	S	S	L	I	A	V	R	E	H	K	A	G	E	P	V	G	Y	G	G	T	W	V	S	E	R	D	T	R	L	G	V	V	A	M	G	Y	.	G	D	G	Y	P	R	A	A	P	S	G	T	P	V	L	V	N	G	R	E	V
Query Conservation																																																												.
Alig confidence															.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation															.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	Q	Q	T	Q	L	G	S	C	Q	P	Q	.	.	D	V	A	I	R	V	L	T	R	V	I	G	H	Y	A	H	R	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	V	D	C	G	W	A	A	L	S	L	H	G	A	G	G	P	Q	G	C	A	A	I	D	G	H	P	E
Template Known Secondary structure									T	S	S		G	G	.	.	G														T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S								S	T	T				G	G	G	G				T	T		T	T
Template Predicted Secondary structure															.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.																		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		P	I	V	G	R	V	A	M	D	M	I	C	V	D	L	G	.	P	Q	A	Q	D	K	A	G	D	P	V	I	L	W	G	E	G
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		L	R	L	V	G	L	T	Q	E	H	G	L	L	E	H	Q	M	D	F	G	R	F	P	V	G	S	V	L	A	L	I	P	Y	H
Template Known Secondary structure									S	S										T	T	S	S		T	T								S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions