Job Description P0A6B4 Confidence 100.00% Date Thu Jan 5 11:02:45 GMT 2012 Rank 33 Aligned Residues 311 % Identity 14% Template c2nvaH_ PDB info PDB header:lyase Chain: H: PDB Molecule:arginine decarboxylase, a207r protein; PDBTitle: the x-ray crystal structure of the paramecium bursaria2 chlorella virus arginine decarboxylase bound to agmatine Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		M	Q	A	A	T	V	V	I	N	R	R	A	L	R	H	N	L	Q	R	L	R	E	L	A	P	A	S	K	M	V	A	V	V	K	A	N	A	Y	G	H	G	L	L	E	T	A	R	T	L	P	D	A	D	A	.	F	G	V	A	R	L	E	E	A	L	R	L	R	A	G	G	I	T	K	P	V	L	L	L	E
Query Conservation																																																								.
Alig confidence																																							.	.	.	.														.
Template Conservation																																							.	.	.	.
Template Sequence		Q	T	K	S	F	Y	V	S	S	P	K	I	V	E	D	L	I	D	Q	W	T	I	L	F	P	R	V	T	P	H	Y	A	V	K	C	N	N	.	.	.	.	D	E	V	L	L	K	T	M	C	D	K	N	V	N	F	D	C	A	S	S	S	E	I	K	K	V	I	Q	I	G	V	S	P	S	R	I	I	F	A
Template Known Secondary structure				S																						T	T							G	G	G			.	.	.	.											T	T							S											T			G	G	G
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure				.															.																																.	.	.	.	.	.
Query SS confidence				.															.																																.	.	.	.	.	.
Query Sequence		G	F	.	F	D	A	R	D	L	P	T	I	S	A	Q	H	F	.	H	T	A	V	H	N	E	E	Q	L	A	A	L	E	E	A	S	L	D	E	P	V	T	V	W	M	K	L	D	T	G	.	.	.	.	.	.	M	H	R	L	G	V	R	P	E	Q	A	E	A	F	Y	H	R	L	T	Q	C	K	N	V	R
Query Conservation				.															.																																.	.	.	.	.	.
Alig confidence				.															.																																.	.	.	.	.	.																						.
Template Conservation																																																																														.
Template Sequence		H	T	M	K	T	I	D	D	L	I	F	A	K	D	Q	G	V	D	I	A	T	F	D	S	S	F	E	L	D	K	I	H	T	Y	H	P	N	C	K	M	I	L	R	I	R	C	D	D	P	N	A	T	V	Q	L	G	N	K	F	G	A	N	E	D	E	I	R	H	L	L	E	Y	A	K	Q	L	.	D	I	E
Template Known Secondary structure			S	S													T								S												T	T							B					T	T		S	B			T	T	T	S	S	B		G	G	G											T	.	T
Template Predicted Secondary structure																																																																														.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.																									.	.
Query SS confidence																																				.	.	.																									.	.
Query Sequence		Q	P	V	N	I	V	S	H	F	A	R	A	D	E	P	K	C	G	A	T	E	K	Q	L	A	I	F	N	T	F	C	E	G	K	.	.	.	P	G	Q	R	S	I	A	A	S	G	G	I	L	L	W	P	Q	S	H	F	D	W	V	R	.	.	P	G	I	I	L	Y	G	V	S	P	L	E	D	R	S	T	G
Query Conservation																																				.	.	.																									.	.
Alig confidence		.												.																						.	.	.																									.	.
Template Conservation		.												.
Template Sequence		.	V	I	G	I	S	F	H	V	G	S	G	.	S	R	N	P	E	A	Y	Y	R	A	I	K	S	S	K	E	A	F	N	E	A	I	S	V	G	H	K	P	Y	I	L	D	I	G	G	G	L	H	A	D	I	G	E	L	S	T	M	S	D	Y	I	N	D	A	I	K	D	F	F	P	E	D	T	V	T	I	V
Template Known Secondary structure		.										B	S	.	B																								T												B																									T	T
Template Predicted Secondary structure		.												.
Template SS confidence
			170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		227	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.			.	.	.	300	.
Predicted Secondary structure						.	.	.																																																																			.	.
Query SS confidence						.	.	.																																																																			.	.
Query Sequence		A	D	F	G	.	.	.	C	Q	P	V	M	S	L	T	S	S	L	I	A	V	R	E	H	K	A	G	E	P	V	G	Y	G	G	T	W	V	S	E	R	D	T	R	L	G	V	V	A	M	G	Y	G	D	G	Y	P	R	A	A	P	S	G	T	P	V	L	V	N	G	R	E	V	P	.	.	I	V	G	R	V
Query Conservation						.	.	.																																																																			.	.
Alig confidence						.	.	.																.	.	.	.	.	.	.																																													.	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		A	E	P	G	R	F	F	A	E	H	Y	S	V	L	A	T	Q	V	I	G	K	R	.	.	.	.	.	.	.	V	R	D	G	L	Y	E	Y	F	F	N	E	S	T	Y	G	G	F	S	N	V	I	F	E	K	S	V	P	T	P	Q	L	L	R	D	V	P	D	D	E	E	Y	V	P	S	V	L	Y	G	C	T
Template Known Secondary structure					S					G	G	G												.	.	.	.	.	.	.			T	T							S			T	T	T	T		T					S									S	S				T	T											S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.								.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		302	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		A	M	.	.	D	M	I	C	V	D	L	G	P	Q	A	Q	D	K	A	G	D	P	V	I	L	W	G
Query Conservation				.	.
Alig confidence				.	.								.
Template Conservation													.
Template Sequence		C	D	G	V	D	V	I	N	H	N	V	.	A	L	P	E	L	H	I	G	D	W	V	Y	F	P	S
Template Known Secondary structure		S		T	T								.							T	T						S	S
Template Predicted Secondary structure													.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions