Job Description P0A6B4 Confidence 100.00% Date Thu Jan 5 11:02:45 GMT 2012 Rank 13 Aligned Residues 330 % Identity 33% Template c2dy3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from corynebacterium glutamicum Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		M	Q	A	A	T	V	V	I	N	R	R	A	L	R	H	N	L	Q	R	L	R	E	L	A	P	A	S	K	M	V	A	V	V	K	A	N	A	Y	G	H	G	L	L	E	T	A	R	T	L	P	D	A	D	A	.	.	F	G	V	A	R	L	E	E	A	L	R	L	R	A	G	G	I	T	K	P	V	L	L	L
Query Conservation																																																								.	.
Alig confidence																																																								.	.
Template Conservation
Template Sequence		M	N	L	L	T	T	K	I	D	L	D	A	I	A	H	N	T	R	V	L	K	Q	M	A	G	P	A	K	L	M	A	V	V	K	A	N	A	Y	N	H	G	V	E	K	V	A	P	V	I	A	A	H	G	A	D	A	F	G	V	A	T	L	A	E	A	M	Q	L	R	D	I	G	I	S	Q	E	V	L	C	W
Template Known Secondary structure				S																						T	T	S												T	T											T	T	T																		T	T			S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	F	F	D	A	R	D	L	P	T	I	S	A	Q	H	F	H	T	A	V	H	N	E	E	Q	L	A	A	L	E	E	A	S	L	D	E	P	V	T	V	W	M	K	L	D	T	G	M	H	R	L	G	V	R	P	E	Q	A	E	A	F	Y	H	R	L	T	Q	C	K	N	V	R	Q	P	V	N	I	V	S
Query Conservation
Alig confidence		.																																		.																																						.
Template Conservation		.																																		.																																						.
Template Sequence		.	I	W	T	P	E	Q	D	F	R	A	A	I	D	R	N	I	D	L	A	V	I	S	P	A	H	A	K	A	L	I	E	T	D	.	A	E	H	I	R	V	S	I	K	I	D	S	G	L	H	R	S	G	V	D	E	Q	E	W	E	G	V	F	S	A	L	A	A	A	P	H	I	.	E	V	T	G	M	F	T
Template Known Secondary structure		.				T	T	S							T	T	T							S									T			.		S								B			S	S		S	S	S	B																T	T		.
Template Predicted Secondary structure		.																																		.																																						.
Template SS confidence
			81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																													.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.
Query Sequence		H	F	A	R	A	D	E	P	K	C	G	A	T	E	K	Q	L	A	I	F	N	T	F	C	E	G	K	.	.	.	.	.	.	P	G	Q	R	S	I	A	A	S	G	G	I	L	L	W	P	Q	S	H	F	D	W	V	R	P	G	I	I	L	Y	G	V	S	P	L	E	D	R	S	T	G	A	D	F	G	C	Q
Query Conservation																													.	.	.	.	.	.
Alig confidence									.	.	.	.	.																.	.	.	.	.	.																																									.	.	.	.
Template Conservation									.	.	.	.	.																																																														.	.	.	.
Template Sequence		H	L	A	C	A	P	E	.	.	.	.	.	T	D	R	Q	I	I	A	F	R	R	A	L	A	L	A	R	K	H	G	L	E	C	P	V	N	H	V	C	N	S	P	A	F	L	T	R	S	D	L	H	M	E	M	V	R	P	G	L	A	F	Y	G	L	E	P	V	A	G	L	E	H	.	.	.	.	G	L	K
Template Known Secondary structure									.	.	.	.	.																		T	T							B								T	T		G	G	G		T	T						G	G	G	G	T			S	S	T	T				.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.																																																														.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	M	S	L	T	S	S	L	I	A	V	R	E	H	K	A	G	E	P	V	G	Y	G	G	T	W	V	S	E	R	D	T	R	L	G	V	V	A	M	G	Y	G	D	G	Y	P	R	A	A	P	S	G	T	P	V	L	V	N	G	R	E	V	P	I	V	G	R	V	A	M	D	M	I	C	V	D	L	G	P
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	M	T	W	E	A	K	V	S	V	V	K	Q	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	V	A	V	V	P	A	G	Y	A	D	G	M	P	R	H	A	Q	G	K	F	S	V	T	I	D	G	L	D	Y	P	Q	V	G	R	V	C	M	D	Q	F	V	I	S	L	G	D
Template Known Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S			G	G	G	T			G	G	G	T	T	T						T	T							S				S	S								T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.																	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		313	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure				.															.
Query SS confidence				.															.
Query Sequence		Q	A	.	Q	D	K	A	G	D	P	V	I	L	W	G	E	G	.	L	P	V	E	R	I	A	E	M	T	K	V	S	A	Y	E	L	I	T	R	L	T	S	R	V	A	M	K	Y	V
Query Conservation				.															.
Alig confidence				.															.
Template Conservation
Template Sequence		N	P	H	G	V	E	A	G	A	K	A	V	I	F	G	E	N	G	H	D	A	T	D	F	A	E	R	L	D	T	I	N	Y	E	V	V	C	R	P	T	G	R	T	V	R	A	Y	V
Template Known Secondary structure			T	T				T	T							S	T	T	S										T	T	S											T	T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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