Job Description P24207 Confidence 1.42% Date Thu Jan 5 11:41:15 GMT 2012 Rank 45 Aligned Residues 192 % Identity 8% Template d1iwga7 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	N	G	L	I	L	S	L	A	V	I	M	F	S	F	G	G	L	E	L	I	G	I	T	A	A	E	A	R	D	P	E	K	S	I	P	K	A	V	N	Q	V	V	Y	R	I	L	L	F	Y	I	G	S	L	V	V	L	L	A	L	Y	P	W	V	E	V	K	S	N	S	S	P	F	V	M	I	F	H	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	W	V	I	A	I	I	I	M	L	A	G	G	L	A	I	L	K	L	P	V	A	Q	Y	P	T	P	F	V	K	I	S	I	H	E	V	V	K	T	L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A
Template Known Secondary structure																		T	T	S				S	S																													T	T				T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.			330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		L	D	S	N	V	V	A	S	A	L	N	F	V	I	L	V	A	S	L	S	V	Y	N	S	G	V	Y	S	N	S	R	M	L	F	G	L	S	V	Q	G	N	A	P	.	.	K	F	L	T	R	V	S	R	R	G	V	P	I	N	S	L	M	L	S	G	A	I	T	S	L	V	V	L	I	N	Y	L	L	P	Q
Query Conservation																																													.	.
Alig confidence																																													.	.
Template Conservation
Template Sequence		A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V	E	N	V	E	R	V	M	A	E	E	G	L	P	P	K	E	A	T	R	K	S	M	G	Q	I	Q	G	A	L	V	G	I	A	M	V	L	S	A	V	F	V	P	M	A	F	F	G	G	S	T	G
Template Known Secondary structure		T	T	T			S																																	T	S			S							G	G	G	T																	T	T	T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	F	G	L	L	M	A	L	V	V	A	T	L	L	L	N	W	I	M	I	C	L	A	H	L	R	F	R	A	A	M	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	Y	R	Q	F	S	I	T	I	V	S	A	M	A	L	S	V	L	V	A	L	I	L	T	P	A	L	C	A	T	M	L	K
Template Known Secondary structure																						T	T	T									S
Template Predicted Secondary structure
Template SS confidence
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions