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Job DescriptionP24207
Confidence2.35%DateThu Jan 5 11:41:15 GMT 2012
Rank28Aligned Residues84
% Identity12%Templatec3b8eC_
PDB info PDB header:hydrolase/transport proteinChain: C: PDB Molecule:sodium/potassium-transporting atpase subunit PDBTitle: crystal structure of the sodium-potassium pump
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   375....380.........390.........400.........410.........420......... 430.........440....
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Query Sequence  VATLLLNWIMICLAHLRFRAAMRRQGRETQFKALLYPFGNYLCIAFLGMILLLMC. . . . . . . . . . TMDDMRLSAILLPVW
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Template Conservation   
  
  

  
       
            
  
                 
 
   
    
               
Template Sequence  HTPFFVTIVVVQWADLVICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLI
Template Known Secondary structure  TTSS
SSS
TTTS
S

S
SSTTTTS




TTTTTGGG
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   912.......920.........930.........940.........950.........960.........970.........980.........990.
 
   445....450........
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Query Sequence  IVFLFMAFKTLRRK
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Template Conservation 
      
   
  
Template Sequence  FVYDEVRKLIIRRR
Template Known Secondary structure  S
Template Predicted Secondary structure 
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   992.......1000.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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