Job Description P32166 Confidence 3.07% Date Thu Jan 5 11:49:43 GMT 2012 Rank 41 Aligned Residues 141 % Identity 21% Template c3ucaB_ PDB info PDB header:transferase Chain: B: PDB Molecule:geranyltranstransferase; PDBTitle: crystal structure of isoprenoid synthase (target efi-501974) from2 clostridium perfringens Resolution 2.00 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		F	G	W	L	S	V	M	G	S	W	Y	L	Q	A	H	T	L	I	P	A	L	I	L	P	A	T	A	C	G	L	L	A	T	A	V	L	N	I	N	N	L	R	D	I	N	S	D	.	R	E	N	G	K	N	T	L	V	V	R	L	G	E	V	N	A	R	R	Y	H	A	C	L	L	M	G	S	L	V	C	L
Query Conservation																																																	.
Alig confidence																		.																															.
Template Conservation																		.
Template Sequence		I	R	P	I	L	M	L	L	S	Y	Y	I	Y	K	S	D	.	Y	K	K	I	L	T	P	A	M	A	I	E	M	I	H	T	Y	S	L	I	H	D	D	L	P	C	M	D	N	D	D	L	R	R	G	K	P	T	N	H	K	V	F	G	E	A	I	A	V	L	A	G	D	A	L	L	N	E	A	M	K	I	L
Template Known Secondary structure													T	T		S		.	G	G	G	G																			T	S	T	T	T	T			S			T	T
Template Predicted Secondary structure																		.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		A	L	F	N	L	F	S	L	H	S	L	W	G	W	L	F	L	L	A	A	P	.	.	.	.	.	L	L	V	K	Q	A	R	Y	V	M	R	E	M	D	P	V	A	M	R	P	M	L	E	R	T	V	K	G	A	L	L	T	N	L	L	F	V	L	G	I	F	L	S	Q
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.																								.	.
Template Conservation																																																			.	.
Template Sequence		V	D	Y	S	L	E	E	G	K	S	A	L	K	A	T	K	I	I	A	D	A	A	G	S	D	G	M	I	G	G	Q	I	V	D	I	I	N	E	D	S	L	K	E	L	D	Y	M	H	L	.	.	K	K	T	G	E	L	I	K	A	S	I	M	S	G	A	V	L	A	E
Template Known Secondary structure																								S	T	T	T											T	T												.	.			T															T	T
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions