Job Description P32166 Confidence 19.80% Date Thu Jan 5 11:49:43 GMT 2012 Rank 18 Aligned Residues 180 % Identity 15% Template c3nf2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative polyprenyl synthetase; PDBTitle: crystal structure of polyprenyl synthetase from streptomyces2 coelicolor a3(2) Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	L	A	W	W	Q	G	H	F	D	P	L	V	A	L	L	A	L	I	T	A	G	L	L	Q	I	L	S	N	L	A	N	D	Y	G	D	A	V	K	G	S	D	K	P	D	R	I	G	P	L	R	G	M	Q	K	G	V	I	T	Q	Q	E	M	K	R	A	L	I	I	T	V	V	L	I	C	L	S	G	L
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.
Template Sequence		A	V	L	S	A	E	V	T	G	A	A	P	E	V	G	V	P	G	A	V	A	V	E	L	V	H	N	F	S	L	L	H	D	D	L	M	D	G	D	E	Q	R	.	.	.	.	.	.	.	R	H	R	D	T	V	W	K	V	H	G	P	A	Q	A	I	L	V	G	D	A	L	F	A	L	A	N	E	V	L	L
Template Known Secondary structure								T	T	T			G	G	G	G																							T					.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.								.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		A	L	V	A	V	A	C	H	T	L	A	.	.	.	D	F	V	G	F	L	I	L	G	G	L	S	I	I	A	A	I	T	Y	T	V	G	N	R	P	Y	G	Y	I	G	L	G	D	I	S	V	L	V	F	F	G	W	L	S	V	M	G	S	W	Y	L	Q	A	H	T	L	I	P	A	L	I	L	P	A	T	A
Query Conservation													.	.	.
Alig confidence													.	.	.																																																		.	.
Template Conservation																																																																	.	.
Template Sequence		E	L	G	T	V	E	A	G	R	A	T	R	R	L	T	K	A	S	R	S	L	I	D	G	Q	A	Q	D	I	S	Y	E	H	R	D	R	V	S	V	E	E	C	L	E	M	E	G	N	K	T	G	A	L	L	A	C	A	S	S	I	G	A	V	.	.	L	G	G	A	D	E	R	T	A	D	T	L	E	K	Y
Template Known Secondary structure		T	T		S																												T	T		S															T														.	.		T	T
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.												.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	G	L	L	A	T	A	V	L	N	I	N	N	L	R	D	I	N	.	.	.	.	.	.	.	.	.	.	.	S	D	R	E	N	G	K	N	T	L	V	V	R	L
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Y	H	L	G	L	A	F	Q	A	V	D	D	L	L	G	I	W	G	D	P	D	A	T	G	K	Q	T	W	S	D	L	R	Q	R	K	K	S	L	P	V	V	A
Template Known Secondary structure																										S	S		T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions