Job Description P32166 Confidence 54.23% Date Thu Jan 5 11:49:43 GMT 2012 Rank 6 Aligned Residues 200 % Identity 16% Template c3lsnA_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranyltranstransferase; PDBTitle: crystal structure of putative geranyltranstransferase from pseudomonas2 fluorescens pf-5 complexed with magnesium Resolution 1.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	L	A	W	W	Q	G	H	F	D	P	L	V	A	L	L	A	L	I	T	A	G	L	L	Q	I	L	S	N	L	A	N	D	Y	G	D	A	V	K	G	S	D	K	P	D	R	I	G	P	L	R	G	M	Q	K	G	V	I	T	Q	Q	E	M	K	R	A	L	I	I	T	V	V	L	I	C	L	S	G	L
Query Conservation
Alig confidence																																							.	.	.	.									.
Template Conservation																																							.	.	.	.									.
Template Sequence		A	Y	A	A	C	E	A	L	G	G	K	P	E	Q	A	N	G	A	A	C	A	V	E	L	I	H	A	Y	S	L	V	H	D	D	L	P	A	.	.	.	.	X	D	D	D	D	L	R	R	.	G	Q	P	T	T	H	K	A	F	D	E	A	C	A	I	L	A	G	D	G	L	Q	S	L	A	F	S	A	L	L
Template Known Secondary structure									T	T			G	G	G	G																			T	S	T	T	.	.	.	.	T	T			S			T	.	T								S
Template Predicted Secondary structure																																							.	.	.	.									.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		112	.	.	.									.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.
Query Sequence		A	L	V	A	.	.	.	.	.	.	.	.	V	A	C	H	T	L	A	D	F	V	G	F	L	I	L	G	G	L	S	I	I	A	A	I	T	Y	T	V	G	N	R	P	Y	G	Y	I	G	L	G	D	I	S	V	L	V	F	F	G	W	L	S	V	M	G	S	W	Y	L	Q	A	H	T	L	I	P	A	L	I
Query Conservation						.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	P	A	L	S	D	A	S	A	E	I	R	L	R	X	V	T	T	L	A	Q	A	A	G	P	A	G	X	V	G	G	Q	A	I	D	L	G	S	V	G	L	K	L	D	Q	Q	A	L	E	Y	X	H	R	H	K	T	G	A	L	I	E	A	S	V	I	L	G	A	L	A	S	G	R	A	E	K	G	E	L	K
Template Known Secondary structure			T	T	S																				S	T	T	T											T	T	T																T															T	T
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	T	A	C	G	L	L	A	T	A	V	L	N	I	N	N	L	R	D	I	N	S	D	R	E	N	G	K	N	T	L	V	V	R	L	G	E	V	N	A	R	R	Y	H	A	C	L	L	M	G	S	L
Query Conservation
Alig confidence																													.
Template Conservation																													.
Template Sequence		A	L	Q	T	Y	A	Q	A	I	G	L	A	F	Q	V	Q	D	D	I	L	D	V	E	S	D	T	A	.	T	L	P	T	Y	P	A	L	L	G	L	A	A	A	K	E	Y	A	L	E	L	R	D	Q	A	L
Template Known Secondary structure																													.
Template Predicted Secondary structure																													.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions