Job Description P32166 Confidence 2.38% Date Thu Jan 5 11:49:43 GMT 2012 Rank 61 Aligned Residues 197 % Identity 13% Template c3lomA_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranyltranstransferase; PDBTitle: crystal structure of geranyltransferase from legionella2 pneumophila Resolution 2.30 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	L	A	W	W	Q	G	H	F	D	P	L	V	A	L	L	A	L	I	T	A	G	L	L	Q	I	L	S	N	L	A	N	D	Y	G	D	A	V	K	G	S	D	K	P	D	R	I	G	P	L	R	G	M	Q	K	G	V	I	T	Q	Q	E	M	K	R	A	L	I	I	T	V	V	L	I	C	L	S	G	L
Query Conservation
Alig confidence																																							.	.	.	.									.
Template Conservation																																							.	.	.	.									.
Template Sequence		V	Y	L	A	G	D	L	I	D	V	D	Q	G	V	L	D	I	I	A	A	A	L	E	L	T	H	C	Y	S	L	I	H	D	D	L	P	A	.	.	.	.	M	D	N	D	D	L	R	R	.	G	K	P	S	C	H	K	A	F	D	E	A	T	A	I	L	V	G	D	G	M	Q	A	L	A	I	E	V	L	L
Template Known Secondary structure									T	T																										S	T	T	.	.	.	.	T	T			S			T	.	T								S
Template Predicted Secondary structure																																							.	.	.	.									.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.																										.	.
Query SS confidence																									.	.	.	.	.	.	.																										.	.
Query Sequence		A	L	V	A	V	A	C	H	T	L	A	D	F	V	G	F	L	I	L	G	G	L	S	.	.	.	.	.	.	.	I	I	A	A	I	T	Y	T	V	G	N	R	P	Y	G	Y	I	G	L	G	D	I	S	V	L	.	.	V	F	F	G	W	L	S	V	M	G	S	W	Y	L	Q	A	H	T	L	I	P	A	L
Query Conservation																									.	.	.	.	.	.	.																										.	.
Alig confidence																									.	.	.	.	.	.	.																										.	.
Template Conservation
Template Sequence		M	R	L	S	P	L	L	P	A	A	Q	V	V	A	I	T	Q	V	L	V	N	A	S	G	I	S	G	M	V	S	G	Q	S	L	D	L	S	E	L	A	K	S	S	V	T	E	E	Q	L	R	E	I	H	L	L	K	T	G	K	L	I	L	A	C	F	E	M	V	L	A	A	Q	H	E	V	S	E	Q	I	K
Template Known Secondary structure					T	T	T	S																	S	T	T	T											T	T	T	S	S															T													T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	P	A	T	A	C	G	L	L	A	T	A	V	L	N	I	N	N	L	R	D	I	N	S	D	R	E	N	G	K	N	T	L	V	V	R	L	G	E	V	N	A	R	R	Y	H	A	C	L	L	M	G	S	L
Query Conservation
Alig confidence																												.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		S	A	L	R	T	Y	G	K	H	I	G	L	V	F	Q	M	Q	D	D	Y	L	D	L	Y	A	P	.	.	.	.	K	T	T	F	A	T	L	F	N	K	Q	Q	L	E	E	E	I	A	V	H	Y	Q	I	A	M
Template Known Secondary structure																												.	.	.	.								S
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions