Job Description P32166 Confidence 13.92% Date Thu Jan 5 11:49:43 GMT 2012 Rank 24 Aligned Residues 187 % Identity 9% Template c3llwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranyltranstransferase (ispa); PDBTitle: crystal structure of geranyltransferase from helicobacter2 pylori 26695 Resolution 2.30 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	L	V	A	L	L	A	L	I	T	A	G	L	L	Q	I	L	S	N	L	A	N	D	Y	G	D	A	V	K	G	S	D	K	P	D	R	I	G	P	L	R	G	M	Q	K	G	V	I	T	Q	Q	E	M	K	R	A	L	I	I	T	V	V	L	I	C	L	S	G	L	A	L	V	A	V	A	C	H	T	L
Query Conservation
Alig confidence																													.	.	.	.									.
Template Conservation																													.	.	.	.									.
Template Sequence		Q	Q	T	E	Y	F	K	I	A	L	S	I	E	C	L	H	T	Y	S	L	I	H	D	D	L	P	C	.	.	.	.	M	D	N	A	A	L	R	R	.	N	H	P	T	L	H	A	K	Y	D	E	T	T	A	V	L	I	G	D	A	L	N	T	Y	S	F	E	L	L	S	N	A	L	L	E	S	H	I	I	V
Template Known Secondary structure		S																							T	S	T	T	.	.	.	.	T	T			S			T	.	T								T																							S		S
Template Predicted Secondary structure																													.	.	.	.									.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		122	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		A	D	F	V	G	F	L	I	L	.	.	.	.	.	G	G	L	S	I	I	A	A	I	T	Y	T	V	G	N	R	P	Y	G	Y	I	G	L	G	D	I	S	V	L	V	F	F	G	W	L	S	V	M	G	S	W	Y	L	Q	A	H	T	L	I	P	A	L	I	L	P	A	T	A	C	G	L	L	A	T	A	V
Query Conservation											.	.	.	.	.
Alig confidence											.	.	.	.	.
Template Conservation
Template Sequence		E	L	I	K	I	L	S	A	N	G	G	I	K	G	M	I	L	G	Q	A	L	D	C	Y	F	E	N	T	P	L	N	L	E	Q	L	T	F	L	H	E	H	K	T	A	K	L	I	S	A	S	L	I	M	G	L	V	A	S	G	I	K	D	E	E	L	F	K	W	L	Q	A	F	G	L	K	M	G	L	C	F
Template Known Secondary structure												S	T	T	T											T	T	T	S															T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	I	N	N	L	R	D	I	N	S	D	R	E	N	G	K	N	T	L	V	V	R	L	G	E	V	N	A	R	R	Y	H	A	C	L	L	M	G	S	L
Query Conservation
Alig confidence													.	.	.	.
Template Conservation													.	.	.	.
Template Sequence		Q	V	L	D	D	I	I	D	V	T	Q	.	.	.	.	A	K	N	S	F	V	N	L	L	G	L	E	R	A	N	N	Y	A	Q	T	L	K	T	E	V	L
Template Known Secondary structure													.	.	.	.			S
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.					.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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