Job Description P32166 Confidence 27.03% Date Thu Jan 5 11:49:43 GMT 2012 Rank 14 Aligned Residues 184 % Identity 13% Template c1wy0A_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranylgeranyl pyrophosphate synthetase; PDBTitle: crystal structure of geranylgeranyl pyrophosphate synthetase from2 pyrococcus horikoshii ot3 Resolution 2.20 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	L	A	W	W	Q	G	H	F	D	P	L	V	A	L	L	A	L	I	T	A	G	L	L	Q	I	L	S	N	L	A	N	D	Y	G	D	A	V	K	G	S	D	K	P	D	R	I	G	P	L	R	G	M	Q	K	G	V	I	T	Q	Q	E	M	K	R	A	L	I	I	T	V	V	L	I	C	L	S	G	L
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.
Template Sequence		V	L	T	S	T	E	A	V	G	G	D	P	L	R	A	I	Y	P	A	V	A	I	E	L	I	H	N	Y	S	L	V	H	D	D	I	M	D	M	D	E	T	R	.	.	.	.	.	.	.	R	G	K	P	T	V	H	R	I	W	G	V	N	M	A	I	L	A	G	D	L	L	F	S	K	A	F	E	A	V	A
Template Known Secondary structure						T	T	T	T	T	S		G	G	G	G																							T				S	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.								.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		112	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.
Query SS confidence					.	.	.	.	.
Query Sequence		A	L	V	.	.	.	.	.	A	V	A	C	H	T	L	A	D	F	V	G	F	L	I	L	G	G	L	S	I	I	A	A	I	T	Y	T	V	G	N	R	P	Y	G	Y	I	G	L	G	D	I	S	V	L	V	F	F	G	W	L	S	V	M	G	S	W	Y	L	Q	A	H	T	L	I	P	A	L	I	L	P	A
Query Conservation					.	.	.	.	.
Alig confidence					.	.	.	.	.																																																										.	.
Template Conservation																																																																			.	.
Template Sequence		R	A	E	I	P	P	E	K	K	A	R	V	L	E	V	I	V	K	A	S	N	E	L	C	E	G	Q	A	R	D	L	E	F	E	K	K	S	T	V	T	I	E	E	Y	M	E	M	I	S	G	K	T	G	A	L	F	E	A	S	A	K	V	G	G	I	.	.	I	G	T	D	N	E	E	Y	I	K	A	L	S
Template Known Secondary structure		T			S																														T	T		S															T														.	.
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.												.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	C	G	L	L	A	T	A	V	L	N	I	N	N	L	R	D	I	N	.	.	.	.	.	.	.	.	.	.	.	S	D	R	E	N	G	K	N	T	L	V	V	R	L	G	E	V	N
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	W	G	R	N	V	G	I	A	F	Q	I	W	D	D	V	L	D	L	I	A	D	E	K	K	L	G	K	P	V	G	S	D	I	R	K	G	K	K	T	L	I	V	A	H	F	F	E	N
Template Known Secondary structure																						S						T	S		S							T
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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