Return to main results Retrieve Phyre Job Id

Job DescriptionP26616
Confidence57.15%DateThu Jan 5 11:43:01 GMT 2012
Rank493Aligned Residues114
% Identity16%Templated5mdha1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   294.....300... ......310.........320.........330.........340.........350.........360.........370..
Predicted Secondary structure 



.




























Query SS confidence 









.




































































Query Sequence  SEKKIVFLGA. GSAGCGIAEMIISQTQREGLSEEAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTDSDVL
Query Conservation   
 


  

.



 


  
       


 


   
  

  


   
  
      

                
Alig confidence 









.












....

















....




















..






Template Conservation   
 

 



 
 

   
  
  ....          

 
 

 ....       
  


        ..  
 
  
Template Sequence  EPIRVLVTGAAGQIAYSLLYSIGN. . . . GSVFGKDQPIILVLLDIT. . . . PMMGVLDGVLMELQDCALPLL. . KDVIATD
Template Known Secondary structure 

SSTTSTTT....TTTT
TT



G....GGT

TT..S
Template Predicted Secondary structure 





....








....




..


Template SS confidence 















































































   2.......10.........20..... ....30.........40... ......50.........60.... .....70.
 
   373......380.........390....... ..400........ .410.........
Predicted Secondary structure 












..............


.





Query SS confidence 
























. . . . . . . . . . . . . .










.










Query Sequence  SLLDVVRNVKPDILIGVSGQTGLFT. . . . . . . . . . . . . . EEIIREMHKHC. PRPIVMPLSNP
Query Conservation   
 
 
  







 
   
 

.............. 



 

   . 









Alig confidence 








..













..............










.










Template Conservation          
..







   
 
 

 


  
  
       
   
 
 
 






Template Sequence  KEEIAFKDL. . DVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP
Template Known Secondary structure 
TTT
..S

S



TT

TTTTS
TT

SSS
Template Predicted Secondary structure 



..

















Template SS confidence 





























































   72.......80 .........90.........100.........110.........120.........130.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions