Return to main results Retrieve Phyre Job Id

Job DescriptionP26616
Confidence100.00%DateThu Jan 5 11:43:01 GMT 2012
Rank11Aligned Residues256
% Identity48%Templated1gq2a2
SCOP infoAminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenase-like, N-terminal domain Malic enzyme N-domain
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  YAGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNN
Query Conservation    
  

  
  






  

  
 
 




 
 
 
 
  
           
 
   
  
   

 


 

  
Alig confidence 















































































Template Conservation 


  

  
  






  

  
 
 




 
 
 
 
  
    
      
 
   
  
   

 


 

  
Template Sequence  KKGYEVLRDPHLNKGXAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLXSLQDRNEKLFYKVLTS
Template Known Secondary structure 

TT
TTT

GGGS
TT
TTSS
S







Template Predicted Secondary structure 




























Template SS confidence 















































































   23......30.........40.........50.........60.........70.........80.........90.........100..
 
   95....100.........110.........120.........130.........140.........150.........160.........170....
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  HLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIG
Query Conservation    

 









 

  

 
 
 
 




  
 
 
  

 


   
 






 








  



 

Alig confidence 















































































Template Conservation    

 









 

  

 
 
 
 




  
 
 
  

 


   
  





 








  



  
Template Sequence  DIERFXPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATXLQSWPESVIKAIVVTDGERILGLGDLGCYGXGIPVG
Template Known Secondary structure  TSTTT
SS

SGGGTT
TSS
S



SSS
GGG


GGGGG
Template Predicted Secondary structure 


































Template SS confidence 















































































   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   175....180.........190.........200.........210.........220.........230......... 240.........250...
Predicted Secondary structure 


























.








Query SS confidence 
































































.













Query Sequence  KLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWP. DVLLQFEDFAQKNA
Query Conservation 

 

 
 


 
   


 







 

 





 
  
  
 

  





 

   

.  


 


   

Alig confidence 
































































.













Template Conservation 

 

   


 
   


 







 

 





 
  
  
 


 





 

    
    
  


   

Template Sequence  KLALYTACGGVKPHQCLPVXLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFXEAVTSRYGXNCLIQFEDFANANA
Template Known Secondary structure  TT


GGGS




TT

S
SS



T
TT

S

Template Predicted Secondary structure 
































Template SS confidence 















































































   183......190.........200.........210.........220.........230.........240.........250.........260..
 
   254.....260.........270
Predicted Secondary structure 





Query SS confidence 
















Query Sequence  MPLLNRYRNEICSFNDD
Query Conservation 
 

 


  
  



Alig confidence 
















Template Conservation 
  
  

     



Template Sequence  FRLLHKYRNKYCTFNDD
Template Known Secondary structure  TTTS

Template Predicted Secondary structure 








Template SS confidence 
















   263......270.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions