Job Description P26616 Confidence 93.94% Date Thu Jan 5 11:43:01 GMT 2012 Rank 102 Aligned Residues 104 % Identity 16% Template c3u62A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima Resolution 1.45 Å

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		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	L	I	A	A	S	R	A	A	G	G	Q	L	S	E	K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R
Query Conservation
Alig confidence														.	.	.																											.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.																											.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	V	V	K	S	L	E	G	V	E	V	.	.	.	K	E	P	V	V	V	V	G	A	G	G	A	A	R	A	V	I	Y	A	L	L	Q	M	G	V	K	.	.	.	.	.	.	.	.	.	.	D	I	W	V	V	N	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	R	A
Template Known Secondary structure								T	T	T				.	.	.		S	S							S													T	T			.	.	.	.	.	.	.	.	.	.							S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.																											.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.											.	.	.	.	.	.	140	.																		.	.	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.						.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.		.	.	420	.
Predicted Secondary structure																																						.	.	.	.	.																							.
Query SS confidence																																						.	.	.	.	.																							.
Query Sequence		E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L	D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	G	L	.	.	.	.	.	F	T	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S	.	N	P	T	S
Query Conservation																																						.	.	.	.	.																							.
Alig confidence																								.	.													.	.	.	.	.											.	.	.	.	.	.							.
Template Conservation																								.	.																												.	.	.	.	.	.
Template Sequence		K	A	L	D	F	P	V	K	I	F	S	L	D	Q	L	D	E	V	V	K	K	A	.	.	K	S	L	F	N	T	T	S	V	G	M	K	G	E	E	L	P	V	S	D	D	S	L	K	N	L	S	.	.	.	.	.	.	L	V	Y	D	V	I	Y	F	D	T	P
Template Known Secondary structure			T			S	S						G	G	G							T		.	.	S						S	S	T	T	T	T	S				S							T	T		S	.	.	.	.	.	.						S	S	S
Template Predicted Secondary structure																								.	.																												.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.							.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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