Job Description P26616 Confidence 97.70% Date Thu Jan 5 11:43:01 GMT 2012 Rank 19 Aligned Residues 260 % Identity 19% Template c3n58D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:adenosylhomocysteinase; PDBTitle: crystal structure of s-adenosyl-l-homocysteine hydrolase from brucella2 melitensis in ternary complex with nad and adenosine, orthorhombic3 form Resolution 2.39 Å

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		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	P	R	I	T	D	D	E	Y	Y	E	F	V	D	E	F	I	Q	A	V	K	Q	R	W	P	D	V	L	L	Q	F	E	D	F	A	Q	K	N	A	M	P	L	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.						.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.						.
Template Sequence		V	K	G	E	T	L	E	E	Y	W	T	Y	T	D	Q	I	F	Q	W	P	D	G	E	P	S	N	.	.	M	I	L	D	D	.	G	G	D	A	T	M	Y	I	L	I	G	A	R	A	E	A	G	E	D	V	L	S	N	P	Q	S	E	E	E	E	V	L	F	A	Q	I	K	K	R	M	A	A	T	P	G	F
Template Known Secondary structure			T	T													T	T			T	T	S				S	.	.					S	.	S	S														T	T				S	S	S			S																	S	T	T
Template Predicted Secondary structure																												.	.						.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
																						259	260	.	.								.	.	.	.	.	.											.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	R	N	.	.	.	.	.	.	.	E	I	C	S	F	N	.	.	.	.	.	.	.	.	.	.	D	D	I	Q	G	T	A	A	V	T	V	G	T	L	I	A	A	S	R	A	A	G	G	Q	L	S	E	K	K	I	V	F	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																																																																.	.	.
Template Sequence		F	T	K	Q	R	A	A	I	K	G	V	T	E	E	T	T	T	G	V	N	R	L	Y	Q	L	Q	K	K	G	L	L	P	F	P	A	I	N	V	N	D	S	V	T	K	S	K	F	D	N	K	Y	G	C	K	E	S	L	V	D	G	I	R	.	.	.	R	G	T	D	V	M	M	A	G	K	V	A	V	V	C
Template Known Secondary structure																S														T				S						T	T	S					T	T																.	.	.								T	T
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L	D	V	V	R	N	V
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	G	D	V	G	K	G	S	A	Q	S	L	A	G	A	G	A	.	.	.	.	.	.	.	.	.	.	.	R	V	K	V	T	E	V	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	C	A	L	Q	A	A	M	D	G	F	E	V	V	T	L	D	D	A	A	S	T	A
Template Known Secondary structure				S												T	T	T		.	.	.	.	.	.	.	.	.	.	.							S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T										G	G	G
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.												.	.	.	.	.	.	280	.	.																				.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	D	I	L	I	G	V	S	G	Q	T	G	L	F	T	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S	N	P	T	S	R	V	E	A	T	P	Q	D	I	I	A	W	T	E	G	N	A	L	V	A	T	G	S	P	F	N	P	V	V	W	K	D	K	I	Y	P	I	A	Q	C
Query Conservation
Alig confidence		.	.																										.	.	.											.	.											.	.
Template Conservation		.	.																										.	.	.											.	.											.	.
Template Sequence		.	.	D	I	V	V	T	T	T	G	N	K	D	V	I	T	I	D	H	M	R	K	M	K	D	M	C	.	.	.	I	V	G	N	I	G	H	F	D	N	.	.	E	I	Q	V	A	A	L	R	N	L	.	.	K	W	T	N	V	K	P	Q	V	D	L	I	E	F	P	D	G	K	R	L	I	L	L	S	E	G
Template Known Secondary structure		.	.	S						S	S		S	S	S	B								S		T	T		.	.	.						S	S	S	T	T	.	.	S	B			G	G	G	T	T	S	.	.							T	T							T	T	S							G	G	G
Template Predicted Secondary structure		.	.																										.	.	.											.	.											.	.
Template SS confidence
				306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330				.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	A	F	I	F	P	G	I	G	L	G	V	I	A	S	G	A	S	R	I	T	D	E	M	L	M	S	A	S	E	T	L	A	Q	Y	S	P	L	V	L	N	G	E	G	M	V	L	P	E	L	K	D	I	Q	K	V	S	R	A	I	A	F	A
Query Conservation
Alig confidence					.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.
Template Sequence		R	L	L	.	.	.	.	.	.	N	L	G	N	A	T	G	H	P	S	F	V	M	S	A	S	F	T	N	Q	V	L	G	Q	I	E	L	F	T	R	T	D	A	Y	K	N	E	V	Y	V	L	P	K	H	L	D	E	K	V	A	R	L	H	L	D
Template Known Secondary structure		S	B		.	.	.	.	.	.					S			S																						S	G	G	G			S	S																		G
Template Predicted Secondary structure					.	.	.	.	.	.
Template SS confidence
		377	.	.							380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions