 |
Job Description | P26616 | Confidence | 78.69% | Date | Thu Jan 5 11:43:01 GMT 2012 |
Rank | 248 | Aligned Residues | 80 |
% Identity | 19% | Template | c3lxdA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:fad-dependent pyridine nucleotide-disulphide |
PDBTitle: crystal structure of ferredoxin reductase arr from novosphingobium2 aromaticivorans
|
Resolution | 2.50 Å |
|
 |
  |   |
294 | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | K | K | I | V | F | L | G | A | G | S | A | G | C | G | I | A | E | M | I | I | S | Q | T | Q | R | E | G | L | S | E | E | A | A | R | Q | K | V | F | M | V | D | R | F | G | L | L | T | D | K | M | P | N | L | L | P | F | Q | T | K | L | V | Q | K | R | E | N | L | S | D | W | D | T | D | S | D | V | L | S |
Query Conservation |   |
  |
|   |
|
|
|   |   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
Template Conservation |   |
  |
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |   | . | . | . | . | . | . | . | . | . |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |
Template Sequence |   |
E | R | A | D | V | V | I | V | G | A | G | H | G | G | A | Q | A | A | I | A | L | R | Q | N | G | F | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | R | V | L | V | I | G | R | E | P | E | I | P | Y | E | R | P | P | L | S | K | E | Y | L | A | R | E | K | T | F | E | R | I | C | . |
. |
. |
. |
. |
. |
. |
. |
I | R |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . | . | . | . | . | . | . | S |
|  |  |  |  |  | S | S | S | S |
|
| B |
| S | G | G | G | G | T | T | T | T | T | T | S | S |
| S | G | G | G | B | . | . | . | . | . | . | . | . | S | S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 70 |
  |
  |   |
374 | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | D | V | V | R | N | V | K | P | D | I | L | I | G | V | S |
Query Conservation |   |
|   |
|   |
|   |   |
|
|
|
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
Template Sequence |   |
P | A | Q | F | W | E | D | K | A | V | E | M | K | L | G | A | E |
Template Known Secondary structure |   |
|  |  |  |  |  |  | T | T |  |  |  |  |  | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|