Job Description P26616 Confidence 94.38% Date Thu Jan 5 11:43:01 GMT 2012 Rank 94 Aligned Residues 156 % Identity 20% Template c3k8zD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of gudb1 a decryptified secondary glutamate2 dehydrogenase from b. subtilis Resolution 2.40 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.																.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																									.													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	I	T	D	D	E	Y	Y	E	F	V	D	E	F	I	Q	A	V	K	Q	R	W	.	P	D	V	L	L	Q	F	E	D	F	A	Q	.	.	K	N	A	M	P	L	L	N	R	Y	R	N	E	I	C	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	D	I	Q	G	T	A	A	V
Query Conservation																									.													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	M	S	F	R	E	L	E	R	L	S	R	G	Y	V	R	A	I	S	Q	I	V	G	P	T	K	D	V	P	A	P	D	V	F	T	N	S	Q	I	M	A	W	M	M	D	E	Y	S	R	I	D	E	F	N	S	P	G	F	I	T	G	K	P	L	V	L	G	G	S	H	G	R	E	S	A	T	A	K	G
Template Known Secondary structure		G	G	S																	G	G	G		B	T	T	T					B		T	T																		T	S			G	G	G	S	S	S			G	G	G	T			S			T	T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	G	T	L	I	A	A	S	R	A	A	G	G	Q	L	S	E	K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	I	C	I	K	E	A	A	K	K	R	G	I	D	I	K	G	A	R	V	V	V	Q	G	F	G	N	A	G	S	Y	L	A	K	F	M	H	D	A	G	A	K	.	.	.	.	.	.	.	.	.	.	V	V	G	I	S	D	A	Y	G	G	L	Y	D	P	E	G	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T			G	G	G									S	S												T	T			.	.	.	.	.	.	.	.	.	.							S	S						T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.											.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L	D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	G	L	F	T	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.															.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.															.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	I	D	C	D	I	L	V	P	A	.	A	I	E	N	Q	I	T	E	E	N	A	H	N	I	.	.	.	.	R	A	K	I	V	V	E	A	A	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	S		S		S	B		T	T	T	G	G	G		.	.	.	.			S						S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.															.	.	.	.
Template SS confidence
																							262	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.					.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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