Job Description P26616 Confidence 71.37% Date Thu Jan 5 11:43:01 GMT 2012 Rank 326 Aligned Residues 156 % Identity 19% Template c3k6jA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein f01g10.3, confirmed by transcript evidence; PDBTitle: crystal structure of the dehydrogenase part of multifuctional enzyme 12 from c.elegans Resolution 2.20 Å

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		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	S	V	A	I	I	G	G	G	T	M	G	K	A	M	A	I	C	F	G	L	A	G	I	E	.	.	.	.	.	.	.	.	.	.	.	T	F	L	V	V	R	N	E	Q	R	C	K	Q	E	L	E	V	M	Y	A	R	E	K	S	F	K	R	L	N	D	K	R	I	E	K	I	N	A	N	L	K	I	T	S
Template Known Secondary structure										S													T	T			.	.	.	.	.	.	.	.	.	.	.						S																			T	T	S											T	T					S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.												.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
									338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L	D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	G	L	F	T	E	E	I	I	R	E	M	H	K	H	C	P	R
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		D	F	H	K	L	S	N	C	D	L	I	V	E	S	V	I	E	D	M	K	L	K	K	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	N	L	E	N	I	C	K	S	T	C	I	F	G	T	N	.	.	T	S	S	L	D	L	N	E	I	S	S	V	L	R	D	P	S	N
Template Known Secondary structure			G	G	G		T	T		S								S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	S		T	T							.	.		S	S	S							T	T	S	S	S	G	G	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.													.	.	.	.	.	.	.	430	.	.	.	.	.			.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		P	I	V	M	P	L	S	N	P	T	S	R	.	.	.	.	.	.	.	.	.	.	.	.	V	E	A	T	P	Q	D	I	I	A	W	T	E	.	.	G	N	A	L	V	A	T	G	S	P	F	N	P	V	V	W	K	D	K	I	Y	P	I	A	Q	C	N	N	A	F	I	F	P	G	I	G	L	G	V	I	A
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.														.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	G	I	H	F	F	N	P	A	N	V	I	R	L	V	E	I	I	Y	G	S	H	T	S	S	Q	A	I	A	T	A	F	Q	A	C	E	S	I	K	K	L	P	V	L	V	G	.	.	.	.	.	.	.	.	.	.	.	.	N	C	K	S	F	V	F	N	R	L	L	H	V	Y	F	D	Q	S	Q	K	L
Template Known Secondary structure									S	S	T	T	T										S	S																T	T							S	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.													.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	A	S	R	I	T	D	E	M	L	M	S	A	S	E	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	Y	E	Y	G	Y	L	P	H	Q	I	D	K	I	I	T	N	F
Template Known Secondary structure				T	S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions