Job Description P26616 Confidence 91.41% Date Thu Jan 5 11:43:01 GMT 2012 Rank 145 Aligned Residues 111 % Identity 23% Template c3hg7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-isomer specific 2-hydroxyacid dehydrogenase family PDBTitle: crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase2 family protein from aeromonas salmonicida subsp. salmonicida a449 Resolution 1.80 Å

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		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.																	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	T	A	A	V	T	V	G	T	L	I	A	A	S	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	G	Q	L	S	E	K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	M	S	E	Y	V	F	G	H	L	L	S	L	M	R	Q	L	P	L	Y	R	E	Q	Q	K	Q	R	L	W	Q	S	H	P	Y	Q	G	L	K	G	R	T	L	L	I	L	G	T	G	S	I	G	Q	H	I	A	H	T	G	K	H	F	G	M	K	.	.	.	.	.	.	.	.	.	.	.	V	L	G	V
Template Known Secondary structure																	T	T										T	T										S	T	T									S													T	T			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.												.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390					.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L	D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	.	.	.	.	G	Q	T	G	L	F	T	E	E	I	I	R	E	M	H	K	H	C	P	R	P
Query Conservation																																																									.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.								.	.	.	.																			.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.																														.	.	.
Template Sequence		S	R	S	G	R	E	R	A	G	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	Y	Q	L	P	A	L	N	K	M	L	A	Q	A	.	.	D	V	I	V	S	V	L	P	A	T	R	E	T	H	H	L	F	T	A	S	R	F	E	H	C	K	P	G	A	.	.	.
Template Known Secondary structure			S	S					T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G							T		.	.	S										S	S	S	T	T	S	B		T	T	T	T	T		S		T	T		.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.																														.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180																					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		412	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	M	P	L	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	F	N	V	G	R
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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