Job Description P26616 Confidence 60.97% Date Thu Jan 5 11:43:01 GMT 2012 Rank 453 Aligned Residues 139 % Identity 17% Template c3fysA_ PDB info PDB header:fatty acid-binding protein Chain: A: PDB Molecule:protein degv; PDBTitle: crystal structure of degv, a fatty acid binding protein2 from bacillus subtilis Resolution 2.50 Å

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		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	I	V	V	T	D	G	E	R	I	L	G	L	G	D	Q	G	I	G	G	M	G	I	P	I	G	K	L	S	L	Y	T	A	C	G	G	I	S	P	A	Y	T	L	P	V	V	L	D	V	G	T	N	N	Q	Q	L	L	N	D	P	L	Y	M	G	W	R	N	P	R	I	T	D	D	E	Y	Y	E	F	V
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.				.	.	.									.	.	.	.	.	.	.	.											.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.				.	.	.									.	.	.	.	.	.	.	.											.	.
Template Sequence		N	I	A	V	V	T	D	S	T	A	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	P	K	E	M	R	E	Q	H	.	.	.	.	Q	I	H	.	.	.	M	I	P	L	Q	V	V	F	.	.	.	.	.	.	.	.	R	E	E	T	Y	R	E	E	I	E	.	.	L	D	W	K	S	F	Y	E	E	V
Template Known Secondary structure									G	G	G	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	T			.	.	.									.	.	.	.	.	.	.	.	S	S					B	T	T	T	.	.	B
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.				.	.	.									.	.	.	.	.	.	.	.											.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.													.	.	.	.	.	.	.	.	20	.					.	.	.				.	.	.	.	.	30	.	.									.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	F	I	Q	A	V	K	Q	R	W	P	D	V	L	L	Q	F	E	D	F	A	Q	K	N	A	M	P	L	L	N	R	Y	R	N	E	I	C	S	F	N	D	D	I	Q	G	T	A	A	V	T	V	G	T	L	I	A	A	S	R	A	A	G	G	Q	L	S	E	K	K	I	V	F	L	G	A	G	S	A	G
Query Conservation
Alig confidence				.	.	.	.	.							.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.							.	.	.	.	.	.	.
Template Sequence		K	K	.	.	.	.	.	H	N	E	L	P	T	.	.	.	.	.	.	.	T	S	Q	P	P	I	G	E	L	V	A	L	Y	E	E	L	G	K	S	Y	D	A	V	I	S	I	H	L	S	S	G	I	S	G	T	F	S	S	A	A	A	A	D	S	M	V	D	N	I	D	V	Y	P	F	D	S	E	I	S	C
Template Known Secondary structure			T	.	.	.	.	.	T	T					.	.	.	.	.	.	.																	T	T	T		S							S		T	T	T		S								G	G	G	G		S	S									S	S
Template Predicted Secondary structure				.	.	.	.	.							.	.	.	.	.	.	.
Template SS confidence
		53	.						.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		308	.	310	.	.	.	.	.	.	.	.			.	320	.	.	.	.		.	.	.
Predicted Secondary structure													.	.							.
Query SS confidence													.	.							.
Query Sequence		C	G	I	A	E	M	I	I	S	Q	T	.	.	Q	R	E	G	L	S	.	E	E	A
Query Conservation													.	.							.
Alig confidence													.	.							.
Template Conservation
Template Sequence		L	A	Q	G	F	Y	A	L	K	A	A	E	L	I	K	N	G	A	S	S	P	E	D
Template Known Secondary structure																	T	T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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